Louis Bernatchez - Professeur au département de biologie

LIVRES
BERNATCHEZ, L. et M. GIROUX. 2012. Les Poissons d'eau douce du Québec et leur répartition dans l'est du Canada. Editions Broquet. 348 p.
BERNATCHEZ, L. et M. GIROUX. 2008. Guide éclair : Poissons du Québec. Editions Broquet.
JOURNAUX
Evolutionary Applications Evolutionary approaches to environmental, biomedical and socio-economic issues. Editeur en chef : Louis Bernatchez
Environmental DNA Dedicated to the study and use of environmental DNA for basic and applied sciences. Éditeur en chef : Louis Bernatchez
ARTICLES
SOUS PRESSE
560. Yates MC, Furlan E, Thalinger B, Yamanaka H, Bernatchez L. Beyond Species Detection - leveraging environmental DNA and environmental RNA to push beyond presence/absence applications. Environmental DNA.
559. Rougemont Q, Leroy T, Rondeau EB, Koop B, Bernatchez L. 2023. Allele surfing causes maladaptation in a Pacific salmon of conservation concern. PLOS Genetics.
558. Bernatchez L, Ferchaud A-L, Berger CS, Venney CJ, Xuereb A. 2023. Genomics for monitoring and understanding species response to global climate change. Nature Reviews Genetics.
557. Yates M, Gaudet-Boulay M, Garcia-Machado E, Côté G, Gilbert A, Bernatchez L. How much is enough? examining the sampling effort necessary to estimate mean eDNA concentrations in lentic systems. Environmental DNA.
PUBLIÉS
2023
556. McMillan J, Morrison B, Chambers N, Ruggerone G, Bernatchez L, Stanford J, Neville H. 2023. A global synthesis of peer-reviewed research on the effects of hatchery salmonids on wild salmonids. Fisheries Management and Ecology. doi10.1111/fme.12643
555. Xuereb A, Nahuelpi RM, Normandeau E, Babin C, Laporte M, Mallet A, Yáñez J, Mallet M, Bernatchez L. 2023. Design and validation of a high-density SNP array for the Eastern oyster (Crassostrea virginica). G3 jkad071
554. Bassi L, Tremblay R, Robert D, Bernatchez L, Ferchaud A-L, Sirois P. 2023. Connectivity and natal sources of Greenland halibut in the Gulf of St. Lawrence inferred from otolith chemistry. Canadian Journal of Fisheries and Aquatic Sciences. doi.org/10.1139/cjfas-2022-0081
553. García-Machado E, Normandeau E, Côté G, Bernatchez L. 2023. How eDNA data filtration, sequence coverage, and primer selection influence assessment of fish communities in northern temperate lakes. Environmental DNA. DOI: 10.1002/edn3.444
552. Sylvestre F, Mérot C, Normandeau E, Bernatchez L. Searching for intra-locus sexual conflicts in the three-spined stickleback (Gasterosteus aculeatus) genome. Evolution doi.org/10.1093/evolut/qpad075
551. Nelson P, Gosselin T, McDougall C, Bernatchez L. 2023. In-stream population structuring of Lake Sturgeon in northern Manitoba, Canada. Fisheries Management and Ecology. doi.org/10.1111/fme.12632
550. Berger CS, Bougas B, Guillaume G, Dumont J-F, Bernatchez L. A qPCR-based method to detect the eel parasitic nematode Anguillicola crassus in intermediate and final hosts. Parasitology Research. 122:1435–1443.
549. Houle C, Gossieaux P, Bernatchez L, Audet C, Garant D. Transgenerational parental and environmental effects on body size and survival in brook charr (Salvelinus fontinalis). Evolutionary Applications doi.org/10.1111/eva.13553
548. Gates K, Sandoval-Castillo J, Brauer CJ, Unmack PJ, Laporte M, Bernatchez L, Beheregaray LB. Environmental selection, rather than neutral processes, best explain regional patterns of diversity in a tropical rainforest fish. Heredity
547. Rondeau E, Christensen K, Minkley D, Leong J, Chan M, Despins C, Mueller A, Sakhrani D, Biagi C, Rougemont Q, Normandeau E, Jones S, Devlin R, Withler R, Beacham T, Naish K, Yáñez J, Neira R, Bernatchez L, Davidson W, Koop B. 2023. Population-size history inferences from the coho salmon (Oncorhynchus kisutch) genome. G3. doi.org/10.1093/g3journal/jkad033
546. Venney CJ, Cayuela H, Rougeux C, Laporte M, Mérot C, Normandeau E, Leitwein M, Dorant Y, Præbel K, Kenchington E, Clément M, Sirois P., Bernatchez L. 2023. Genome-wide DNA methylation predicts environmentally-driven life history variation in a marine fish. Evolution. 77: 186–198.
545. Brauer CJ, Sandoval-Castillo J, Gates K, Hammer M, Unmack PJ, Bernatchez L, Beheregaray LB. 2023. Natural hybridisation reduces vulnerability to climate change. Nature Climate Change. 13: 282–289.
544. Venney CJ, Bouchard R, April J, Normandeau E, Lecomte L, Côté G, Bernatchez L. 2023. Captive rearing effects on the methylome of Atlantic salmon after oceanic migration: sex-specificity and intergenerational stability. Molecular Ecology Resources. doi.org/10.1111/1755-0998.13766
543. Ghinter L, Anderson C, Robert D, Winkler G, Bernatchez L, Audet C. 2023. A first glimpse of larval ecology of halibut species in the Gulf of St. Lawrence, Canada. Journal of Fish Biology. 102: 712-717.
542. Martinez-Silva MA, Dupont-Prinet A, Houle C, Vagner M, Garant D, Bernatchez L, Audet C. 2023. Growth regulation in brook charr Salvelinus fontinalis. General and Comparative Endocrinology. 331: 114160.
2022
541. Denys GPJ, Daszkiewicz P, Urtizberea F, Bernatchez L. 2022. Diadromous fishes from Saint-Pierre and Miquelon archipelago: diagnoses, taxonomy, nomenclature and distribution. Cybium 46: 385-413.
540. Ferchaud A-L, Normandeau E, Babin C, Præbel K, Ras H, Audet C, Morgan J, Treble M, Walkusz W, Sirois P, Bernatchez L. 2022. A cold-water fish striving in a warming ocean; insights from Whole Genome Sequencing of the Greenland Halibut in the Northwest Atlantic. Frontiers in Marine Science doi.org/10.3389/fmars.2022.992504.
539. Caron F, Laporte M, Bernatchez L. 2022. Inventaire ichtyologique du bassin versant de la zone du Chêne et de la forêt de Seigneurie de Lotbinière au moyen de l’ADN environnemental. Le Naturaliste canadien 146: 3–18.
538. Gaudet-Boulay M, Garcia-Machado E, Laporte M, Yates M, Bougas B, Côté G, Hernandez C, Gilbert A, Bernatchez L. 2022. Relationship between brook charr (Salvelinus fontinalis) eDNA concentration and angling data in structured wildlife areas. Environmental DNA. 4: doi.org/10.1002/edn3.341.
537. Bouchard R, April J, Bernatchez L. 2022. Effect of catch-and-release and temperature at release on reproductive success of Atlantic salmon (Salmo salar L.) in the Rimouski River, Québec, Canada. Fisheries Management and Ecology. 6: 888-896.
536. Segherloo IH, Chaloshtory SN, Naser MD, Yasser AG, Tabatabaei SN, Piette-Lauziere G, Mashtizadeh A, Elmi A, Sedighi O, Changizi A, Hallerman E, Bernatchez L. 2022. Sympatric morphotypes of the restricted-range Tashan Cave Garra: distinct species or a case of phenotypic plasticity? Environmental Biology of Fishes. 105: 1251-1260.
535. Segherloo IH, Tabatabaei SN, Abdoli A, Freyhof J, Normandeau E, Levin B, Geiger MF, Matthias F, Laporte M, Hallerman E, Bernatchez L. 2022. Biogeographic insights from a genomic survey of Salmo trouts from the Aralo-Caspian regions. Hydrobiologia. doi: 849: 4325–4339.
534. Xuereb A, Rougemont Q, Dallaire X, Moore J-S, Normandeau E, Bougas B, Perreault-Payette A, Koop B, Withler R, Beacham T, Bernatchez L. 2022. Re-evaluating Coho salmon (Oncorhynchus kisutch) conservation units in Canada using genomic data. Evolutionary Applications. 15 : 1925-1944.
533. Mérot C, Stenløkk KSR, Venney C, Laporte M, Moser M, Normandeau E, Árnyasi M, Kent M, Rougeux C, Flynn JM, Lien S, Bernatchez L. 2022. Genome assembly, structural variants, and genetic differentiation between lake whitefish young species pairs (Coregonus sp.) with long and short reads. Molecular Ecology 32:1458–1477.
532. Dorant Y, Laporte M, Rougemont Q, Cayuela H, Rochette R, Bernatchez L. 2022. Landscape genomics of the American lobster (Homarus americanus). Molecular Ecology. 31: 5182-5200.
531. Liu SL, Tengstedt ANB, Jacobsen MW, Pujolar JM, Jonsson B, Lobon-Cervia J, Bernatchez L, Hansen, MM. 2022. Genome-wide methylation in the panmictic European eel (Anguilla anguilla). Molecular Ecology. 31: doi10.1111/mec.16586
530. Cairns D, Benchetrit J, Bernatchez L, Bornarel V, Casselman J, Castonguay M, Charsley A, Dorow M, Drouineau H, Frankowski J, Haro A, Hoyle S, Knickle C, Koops M, Poirier L, Thorson J, Young J, Zhu X. 2022. Thirteen novel ideas and underutilized resources to support progress toward a range-wide American eel stock assessment. Fisheries Management and Ecology. 29:516-541.
529. Laporte M, Berger CS, García-Machado E, Côté G, Morissette O, Bernatchez L. 2022. Cage transplant experiment shows weak transport effect on relative abundance of fish community composition as revealed by eDNA metabarcoding. Ecological Indicators. 137: 108785.
528. Venney CJ, WellbandKW, Normandeau E, Houle C, Garant D, Audet C, Bernatchez L. 2022. Thermal regime during parental sexual maturation, but not during offspring rearing, modulates DNA methylation in brook charr (Salvelinus fontinalis). Proceedings of the Royal Society of London, B. 289: 20220670.
527. Oomen RA, Knutsen H, Moland E, Olsen EM, Knutsen JA, Bernatchez L. Stenseth NC, Hart P. 2022. Nothing so boundless, nothing so patient: Obituary for Professor Jeffrey Alexander Hutchings (1958–2022). Fish and Fisheries. 23:519–521.
526. Leitwein M, Wellband K, Cayuela H, Le Luyer J, Mohns K, Withler R, Bernatchez L. 2022. Strong parallel differential gene expression induced by hatchery rearing weakly associated with methylation signals in adult Coho Salmon (Oncorhynchus kisutch). Genome Biology and Evolution. 14: evac137
525. Segherloo IH, Tabatabaei S, Abdollahi-Mousavi E, Hernandez C, Normandeau, E, Laporte M, Amiri M, GhaedRahmati N, Hallerman E, Bernatchez L. 2022. eDNA metabarcoding as a means to assess distribution of subterranean fish community: Iranian blind cave fishes as a case study. Environmental DNA. 4:402–416.
524. Bouchard R, Wellband K, Lecomte L, Bernatchez L, April J. 2022. Effects of stocking at the parr stage on the reproductive fitness and genetic diversity of a wild population of Atlantic salmon (Salmo salar L.). Evolutionary Applications. 15: 838-852.
523. Ferchaud AL, Mérot C, Normandeau E, agoussis J, Babin C, Djambazian H, Berube P, Audet C, Treble M, Walkusz W, Bernatchez L, 2022. Chromosome-level assembly reveals a putative Y-autosomal fusion in the sex determination system of the Greenland Halibut (Reinhardtius hippoglossoides). G3. 12: jkab37
522. Cayuela H, Jacob S, Schtickzelle N, Verdonck R, Philippe H, Laporte M, Huet M, Bernatchez L, Legrand D. 2022. Transgenerational plasticity of dispersal-related traits in a ciliate: genotype-dependency and fitness consequences. Oikos. e08846
521. Rougemont Q, Xuereb A, Dallaire X, Moore JS, Normandeau E, Withler R, Van Doornik D, Crane P, Naish K-A, Garza J, Beacham T, Koop B, Bernatchez L. Long distance migration is a major factor driving local adaptation at continental scale in a Pacific Salmon. Molecular Ecology. 32: 542–559.
520. Dubois-Gagnon M-P, Bernatchez L, Bélisle M, Dubois Y, Mazerolle M. Distribution of the boreal chorus frog (Pseudacris maculata) in an urban environment using environmental DNA. 2022. Environmental DNA. 4: 326-338.
519. Caza-Allard I, Laporte M, Côté G, April J, Bernatchez L. 2022. Effect of biotic and abiotic factors on the production and degradation of fish environmental DNA: an experimental evaluation. Environmental DNA. 4: 453-468.
518. Jacobsen MW, Jensen NW, Nygaard R, Præbel K, Jónsson B, Nielsen NH, Pujolar JM, Fraser DJ, Bernatchez L, Hansen MM. 2022. A melting pot in the Arctic: Analysis of mitogenome variation in Arctic char (Salvelinus alpinus) reveals a 1000-km contact zone between highly divergent lineages. Ecology of Freshwater Fish. 31: 330-346.
517. Attard C, Sandoval-Castillo J, Brauer C, Unmack P, Schmarr D, Bernatchez L, Beheregaray L. 2022. Fish out of water: Genomic insights into persistence of rainbowfish populations in the desert. Evolution. 76: 171-183.
516. Miller J, Garant D, Perrier C, Juette T, Jameson J, Normandeau E, Bernatchez L, Réale D. 2022. Linking genetic, morphological, and behavioural divergence between inland island and mainland deer mice. Heredity. 128: 97-106.
515. Hu Y, Bernatchez L. Fuwen Wei—Recipient of the 2022 Molecular Ecology Prize. Molecular Ecology. 31: 31-36.
514. Garcia-Machado Erik, Laporte M, Normandeau E, Hernandez C, Côté G, Paradis Y, Mingelbier M, Bernatchez L. 2022. Fish community shifts along a strong fluvial environmental gradient revealed by eDNA metabarcoding. Environmental DNA. 4:117–134.
2021
513. Lehmann R, Kovařík A, Ocalewicz K, Kirtiklis L, Tegner JN, Wanzenböck J, Bernatchez L, Lamatsch DK, Symonová R. 2021. DNA transposon expansion is associated with genome size increase in mudminnows. Genome Biology and Evolution. 13: evab228.
512. Smith S, Normandeau E, Djambazian H, Nawarathna P, Berube P, Muir A, Ragoussis J, Penney C, Scribner K, Luikart G, Wilson C, Bernatchez L. 2021. A chromosome-anchored genome assembly for Lake Trout (Salvelinus namaycush). Molecular Ecology Resources. 22: 679-694.
511. Wellband K, Roth D, Linnansaari T, Curry A, Bernatchez L. 2021. Environment-driven reprogramming of gamete DNA methylation occurs during maturation and is transmitted intergenerationally in Atlantic Salmon. G3. 11: jkab353.
510. Lavoie C, Wellband C, Perreault-Payette A, Bernatchez L, Derome N. 2021. Artificial rearing of Atlantic salmon juveniles for supportive breeding programs induces long term effects on gut microbiota after stocking. Microorganisms. 9: 1932.
509. Anastasiadi D, Venney CJ, Bernatchez L, Wellenreuther M. 2021. Epigenetic inheritance and reproductive mode in plants and animals. Trends in Ecology & Evolution. 36:1124-1140.
508. Plante F, Bourgault P, Dubois Y, Bernatchez L. 2021. Environmental DNA as a detection and quantitative tool for stream-dwelling salamanders: a comparison with the traditional active search method. Environmental DNA. 3:1128–1141.
507. Dallaire X, Normandeau E, Mainguy J, Tremblay J-E, Bernatchez L, Moore J-S. 2021. Genomic data support management of anadromous Arctic Char fisheries in Nunavik by highlighting neutral and putatively adaptive genetic variation. Evolutionary Applications. 14: 1880-1897.
506. Laporte M, Reny-Nolin E, Chouinard V, Hernandez C, Normandeau E, Bougas B, Côté C, Behmel S, Bernatchez L. 2021. Proper environmental DNA Metabarcoding data transformation reveals temporal stability of fish communities in a dendritic river system. Environmental DNA. 3: 1007-1022.
505. Mathon L, Guérin P-E, Normandeau E, Valentini A, Noel C, Lionnet C, Linard B, Thuiller W, Bernatchez L, Mouillot D, Dejean T, Manel S. 2021. Benchmarking bioinformatic tools for fast and accurate eDNA metabarcoding species identification. Molecular Ecology Resources. 21: 2565-2579.
504. Segherloo IH, Berrebi P, Ferchaud A-L, Freyhof J, Geiger M, Levin BA, Normandeau E, Bernatchez L. 2021. A genomic perspective on an old question: Salmo trouts or Salmo trutta (Teleostei: Salmonidae)? Molecular Phylogenetics and Evolution. 162: 107204.
503. Mérot C, Berdan E, Cayuela H, Djambazian H, Ferchaud A-L, Laporte M, Normandeau L, Ragoussis J, Wellenreuther M, Bernatchez L. 2021. Locally Adaptive Inversions Modulate Genetic Variation at Different Geographic Scales in a Seaweed Fly. Molecular Biology and Evolution. 38: 3953-3971.
502. Ferchaud A-L, Mérot C, Normandeau E, Ragoussis I, Babin C, Djambazian H, Bérubé P, Audet C, Walkusz W, Treble M, Bernatchez L. 2021. Chromosome-level assembly reveals a putative Y-autosomalfusion in the sex determination system of the Greenland Halibut (Reinhardtius hippoglossoides). G3. jkab37.
501. Bilgmann K, Armansin N, Ferchaud A-L, Normandeau E, Bernatchez L, Harcourt R, Ahonen H, Lowther A, Goldsworthy SD, Stow A. 2021. Low effective population size in the genetically bottlenecked Australian sea lion (Neophoca cinerea) is insufficient to maintain genetic variation. Animal Conservation. doi.org/10.1111/acv.12688
500. Leitwein M, Cayuela H, Bernatchez L. 2021. Associative-overdominance and negative epistasis shape genome-wide ancestry landscape in supplemented fish populations. Genes. 12:524.
499. Leitwein M, Laporte M, Le Luyer J, Mohns K, Normandeau E, Withler R, Bernatchez L. 2021. Epigenomic modifications induced by hatchery rearing persist in germ line cells of adult salmon after their oceanic migration. Evolutionary Applications. 14: 2402-2413.
498. Cayuela H, Dorant Y, Mérot C, Normandeau E, Gagnon-Harvey S, Sirois P, Bernatchez L. 2021. Thermal adaptation rather than demographic history drives genetic structure inferred by copy number variants in a marine fish. Molecular Ecology. 30: 1624-1641.
497. Wellband K, Baillie S, Bentzen P, Bernatchez L. 2021. Genetic Diversity. In: Lake Charr Salvelinus namaycush: Biology, Ecology, Distribution, and Management, eds. Muir A, Krueger C, Riley S, Hansen M. Springer Fish & Fisheries Series. 119-165.
496. Christensen K, Le Luyer J, Chan M, Rondeau E, Koop B, Bernatchez L, Devlin R. 2021. Assessing the effects of genotype-by-environment interaction on epigenetic, transcriptomic, and phenotypic response in a Pacific salmon. G3:Genes, Genomes, Genetics. 11: jkab021
495. Policarpo M, Fumey J, Lafargeas P, Naquin D, Thermes C, Naville M, Dechaud C, Volff J-N, Cabau C, Klopp C, Rask Møller P, Bernatchez L, García-Machado E, Rétaux S, Casane D. Contrasted gene decay in subterranean vertebrates: insights from cavefishes and fossorial mammals. Molecular Biology and Evolution. 38:589–605.
494. Pan Q, Feron R, Jouanno E, Darras H, Herpin A, Koop K, Rondeau E, Goetz FW, Larson WA, Bernatchez L, Tringali M, Curran SS, Saillant E, Denys GPJ, von Hippel FA, Chen S, López JA, Verreycken H, Ocalewicz K, Guyomard R, Eche C, Lluch J, Roques C, Hu H, Tabor R, DeHaan P, Nichols KM, Journot L, Parrinello H, Klopp C, Interesova EA, Trifonov V, Schartl M, Postlethwait J, Guiguen Y. 2021. The rise and fall of the ancient northern pike master sex determining gene. eLife. 10:e62858. DOI: https://doi.org/10.7554/eLife.62858
493. Sevellec M, Lacoursière‐Roussel A, Bernatchez L, Normandeau E, Solomon E, Arreak A, Fishback L, Howland K. 2021. Detecting community change in Arctic marine ecosystems using the temporal dynamics of environmental DNA (eDNA). Environmental DNA. 3:573–590.
492. Popovic I, Bernatchez, L. 2021. Uncovering endemism in a lake of invasive species introgression. Molecular Ecology. 30:880–883
491. Deiner K, Yamanaka H, Bernatchez B, 2021. The future of biodiversity monitoring and conservation utilizing environmental DNA. Environmental DNA. 3:3–7.
490. Afzali SF, Bourdages H, Laporte M, Mérot C, Normandeau E. Audet C, Bernatchez L. 2021. Comparing Environmental Metabarcoding and Trawling Survey of Demersal Fish Communities in the Gulf of St. Lawrence, Canada. Environmental DNA. 2021;3:22-42.
489. Boivin-Deslile D, Laporte M, Burton F, Dion R, Normandeau E, Bernatchez L. 2021. Using environmental DNA for biomonitoring of freshwater fish communities: Comparison with established gillnet surveys in a boreal hydroelectric impoundment. Environmental DNA. 3:105–120.
488. Williams M-A, Hernandez C, O'Sullivan A, April J, Regan F, Bernatchez L, Parle-McDermott A. 2021. Comparing CRISPR-Cas and qPCR eDNA assays for the detection of Atlantic salmon (Salmo salar L.). Environmental DNA. 3:297–304.
487. Hashemzadeh I, Ghojoghi F, Tabatabaei SN, Normandeau E, Hernandez C, Hallerman E, Bernatchez L. 2021. Population Genomics of the Southern Caspian Sea volba (Rutilus caspicus). Hydrobiologia. 848, 345–361.
2020
486. Benestan L, Rougemont Q, Senay C, Normandeau E, Parent E, Rideout R, Bernatchez L, Lambert Y, Audet C, Parent, G. 2020. Population genomics and history of speciation reveal fishery management gaps in two related redfish species (Sebastes mentella and Sebastes fasciatus) Evolutionary Applications. 14:588–606.
485. Xuereb A, D’Aloia CC, Daigle RM, Andrello M, Dalongeville A, Manel S, Mouillot D, Guichard F, Côté IM, Curtis JMR, Bernatchez L, Fortin M-J. 2020. Marine Conservation and Marine Protected Areas. Pp. 413-446, In Marjorie F. Oleksiak and Om P. Rajora (eds.), Population Genomics: Marine Organisms, Population Genomics [Om P. Rajora (Editor-in-chief)], https://doi.org/10.1007/13836_2018_63 Springer Nature Switzerland
484. Berger C, Hernandez C, Laporte M, Côté G, Paradis Y, Kameni T, Dominique W, Normandeau E, Bernatchez L. 2020. Fine‐scale environmental heterogeneity shapes fluvial fish communities as revealed by eDNA metabarcoding. Environmental DNA. 2:647–666.
483. Rougemont Q, Moore J-S, Leroy T, Normandeau E, Rondeau EB, Withler RE, Van Doornik DM, Crane PA, Naish KA, Garza JC, Beacham TD, Koop BF, Bernatchez L. 2020. Demographic history, linked selection, and recombination shape the genomic landscape of a broadly distributed Pacific salmon. PlosGenetics. 16: e1008348.
482. Bertolotti A, Layer R, Gundappa MK, Gallagher M, Pehlivanoglu E, Nome T, Robledo D, Kent M, Røsæg L, Holen M, Mulugeta T, Ashton T, Hindar K, Sægrov H, Florø-Larsen B, Erkinaro J, Primmer C, Bernatchez L, Martin S, Johnston I, Sandve S, Lien S, Macqueen DJ. 2020. The structural variation landscape in 492 Atlantic salmon genomes. Nature Communications 11: 5176.
481. Whitaker JM, Price LE, Boase J, Bernatchez L, Welsh AB. 2020. Detecting fine-scale population structure in the age of genomics: a case study of lake sturgeon in the Great Lakes. Fisheries Research. 230: 105646.
480. Dorant Y, Cayuela H, Wellband K, Laporte M, Rougemont Q, Mérot C, Normandeau E, Rochette R, Bernatchez L. 2020. Copy number variants outperform SNPs to reveal genotype-temperature association in a marine species. Molecular Ecology. 29: 29:4765–4782.
479. Xuereb A, D'Aloia C, Andrello M, Bernatchez L, Fortin M-J. 2021. Incorporating neutral and adaptive genomic data into marine conservation planning. Conservation Biology. 34: 909-920.
478. Smith S, Brauer C, Sasaki M, Unmack P, Guillot G, Laporte M, Bernatchez L, Beheregaray L. 2020. Latitudinal variation in climate-associated genes imperils range-edge populations. Molecular Ecology. 29: 4337-4349.
477. Ferchaud A-L, Leitwein M, Laporte M, Boivin-Delisle D, Bougas B, Hernandez C, Normandeau E, Thibault I, Bernatchez L. 2020. Adaptive and maladaptive genetic diversity in small populations; insights from the Brook Charr (Salvelinus fontinalis) case study. Molecular Ecology. 29: 3429-3445.
476. Tabatabaei Seyedeh N, Abdoli A, Hashemzadeh Segherloo I, Normandeau E, Ahmadzadeh F, Nejat F, Bernatchez L. 2020. Fine-scale population genetic structure of Endangered Caspian Sea trout, Salmo caspius: implications for conservation. Hydrobiologia. 847 (16): 3339-3353.
475. Sandoval-CastilloJ, Gates K, Brauer CJ, Smith S, Bernatchez L, Beheregaray LB. Adaptation of plasticity to predicted climates in Australian rainbowfishes (Melanotaenia) across climatically defined bioregions. Proceedings of the National Academy of Sciences USA. 117: 17112-17121.
474. Cayuela H, Rougemont Q, Laporte M, Mérot C, Normandeau E, Dorant Y, Tørresen O, Siv H, Sissel J, Sirois P, Castonguay M, Jansen T, Praebel K, Clément M, Bernatchez L. Shared ancestral polymorphism and chromosomal rearrangements as potential drivers of local adaptation in a marine fish. Molecular Ecology. 29:2379–2398.
473. Loeza-Quintana T, Abbott C, Heath D, Bernatchez L, Hanner R. 2020. Pathway to Increase Standards and Competency of eDNA Surveys (PISCeS)—Advancing collaboration and standardization efforts in the field of eDNA. Environmental DNA. 2:255-260.
472. Lu G, Li S, Zhao J, Wang C, Liao X, Wang J, Luo M, Zhu L, Bernatchez L. 2020. Evolution and genetics of bighead and silver carps: native population conservation versus invasive species control. Evolutionary Applications. 13:1351-1362.
471. Hernandez C, Bougas B, Perreault A, Simard A, Côté G, Bernatchez L. 2020. 60 specific eDNA qPCR assays to detect invasive, threatened and exploited freshwater vertebrates and invertebrates in Eastern Canada. Environmental DNA. 2:373-386.
470. Gossieaux P, Lavoie E, Sirois P, Thibault I, Bernatchez L, Garant D. 2020. Effects of genetic origin on phenotypic divergence in Brook Trout populations stocked with domestic fish. Ecosphere. 11(5):e03119.
469. Laporte M, Bougas B, Côté G, Champoux O, Paradis Y, Morin J, Bernatchez L. Caged fish experiment and hydrodynamic bidimensional modeling highlight the importance to consider 2D dispersion in fluvial environmental DNA studies. Environmental DNA. 2 : 362-372.
468. Carrier E, Ferchaud AL, Normandeau E, Sirois P, Bernatchez L. 2020. Estimating the contribution of Greenland Halibut (Reinhardtius hippoglossoides) stocks to nurseries by means of Genotyping-By-Sequencing: sex and time matter. Evolutionary Applications. 13:2155–2167.
467. Smith S, Amish S, Bernatchez L, Le Luyer J, Wilson C, Boeberitz O, Luikart G, Scribner K. 2020. Mapping of adaptive traits enabled by a high-density linkage map for lake trout. G3: Genes, Genomes, Genetics. 10:1929-1947.
466. Beacham T, Wallace C; Jonsen K, McIntosh B, Candy J, Rondeau E; Moore JS, Bernatchez L, Withler R. 2020. Accurate estimation of Conservation Unit contribution. to coho salmon mixed-stock fisheries in British Columbia, Canada using direct DNA sequencing for single nucleotide polymorphisms. Canadian Journal of Fisheries and Aquatic Sciences. 77: 1302-1315.
465. Berger CS, Bougas B, Turgeon S, Ferchiou S, Ménard N, Bernatchez L. 2020. Ground truthing of pelagic forage fish detected by hydroacoustics in a whale feeding area using environmental DNA. Environmental DNA. 2:477–492.
464. Madsen RPA, Jacobsen MW, O'Malley KG, Nygaard R, Præbel K, Jonsson B, Pujolar JM, Fraser DJ, Bernatchez L, Hansen MM. 2020. Genetic population structure and variation at phenology-related loci in anadromous Arctic char (Salvelinus alpinus). Ecology of freshwater Fish. 29:170-183.
463. Morissette O, Bernatchez L, Wiendenbeck M, Sirois P. 2020. Deciphering lifelong thermal niche using high-resolution otolith δ18O thermometry exemplified within supplemented lake trout (Salvelinus namaycush) populations. Freshwater Biology. 65: 1114-1127.
462. Nikolic N, Liu S, Magnus J, Bjarni J, Bernatchez L, Gagnaire P-A, Hansen MM. 2020. Speciation history of European (Anguilla anguilla) and American eel (A. rostrata), analyzed using genomic data. Molecular Ecology. 29: 29: 565– 577.
461. Mérot C, Violaine L, Normandeau E, Bernatchez L, Wellenreuther M. 2020. Balancing selection via life-history trade-offs maintains an inversion polymorphism in a seaweed fly. Nature Communications. 11 : 670.
460. O’Sullivan AM, Samways KM, Perreault A, Hernandez C, Gautreau MD, Curry RA, Bernatchez L. 2020. Space invaders: searching for invasive Smallmouth Bass (Micropterus dolomieu) in a renowned Atlantic Salmon (Salmo salar) river. Ecology and Evolution. 10: 2588–2596
459. Leitwein M, Duranton M, Rougemont Q, Gagnaire P-A, Bernatchez L. Using haplotype information for conservation genomics. Trends in Ecology & Evolution. 21:4755-4769.
458. Fuller J, Ferchaud A-L, Laporte M, Le Luyer J, Davis T, Côté S, Bernatchez L. 2020. Absence of founder effect and evidence for adaptive divergence in a recently introduced insular population of white-tailed deer (Odocoileus virginianus). Molecular Ecology. 29: 86– 104.
457. Wang J, Gauughan S, Lamer J, Deng C, Hu W, Wachholtz M, Qin S, Nie H, Liao X, Ling Q, Li W, Zhu L, Bernatchez L, Wang C, Lu G. 2020. Resolving the genetic paradox of invasions: Preadapted genomes and postintroduction hybridization of bigheaded carps in the Mississippi River Basin. Evolutionary Applications. 13:263–277.
2019
456. Beacham T, Wallace C, Jonsen K, McIntosh Brenda, Candy J, Willis D, Lynch C, Moore JS, Bernatchez L, Withler R. 2018. Comparison of coded-wire tagging with parentage-based tagging and genetic stock identification in a large-scale coho salmon fisheries application in British Columbia, Canada. Evolutionary Applications. 12:230-254.
455. Leitwein M, Cayuela H, Ferchaud AL, Normandeau E, Gagnaire PA, Bernatchez L. 2019. The role of recombination on genome-wide patterns of local ancestry exemplified by supplemented Brook Charr populations. Molecular Ecology. 28:4755-4769.
454. Leduc N, Lacoursière-Roussel A, Howland KL, Archambault P, Sevellec M, Normandeau É, Dispas A, Winkler G, McKindsey CW, Simard N, Bernatchez L. 2019. Comparing eDNA metabarcoding and species collection for documenting Arctic metazoan biodiversity. Environmental DNA. 1:342-358.
453. Sevellec M, Laporte M, Bernatchez A, Derome N, Bernatchez L. 2019. Evidence for host effect on the intestinal microbiota of whitefish (Coregonus sp.) species pairs and their hybrids. Ecology and Evolution. 9:11762-11774.
452. Laporte M, Le Luyer J, Rougeux C, Dion-Côté A-M, Krick M, Bernatchez L. 2019. DNA methylation reprogramming, TEs derepression and postzygotic isolation of nascent species. Science Advances. 5 (10): eaaw1644.
451. Rougeux C, Gagnaire PA, Praebel K, Seehausen O, Bernatchez L. Polygenic selection drives the evolution of convergent transcriptomic landscapes across continents within a Nearctic sister-species complex. Molecular Ecology. 28:4388-4403.
450. Seyer Y, Gauthier G, Bernatchez L, Therrien J-F. 2019. Sexing a monomorphic plumage seabird using morphometrics and assortative mating. Waterbirds 42: 380-392.
449. Rougeux C, Gagnaire P-A, Bernatchez L. 2019. Model‐based demographic inference of introgression history in European whitefish species pairs. Journal of Evolutionary Biology. 32: 806– 817.
448. Schembri S, LeBlanc M, Bernatchez S, Arnold S, Kamula M, Litvinov A, Bernatchez L, Fortier L. 2019. Hudson Bay Fish and Fisheries. P. 255-274 in Kuzyk Z, Barber D. eds. From Science to Policy in the Greater Hudson Bay Marine Region, An Integrated Regional Impact Study (IRIS) of Climate Change and Modernization. Winnipeg Manitoba.
447. Dorant Y, Benestan L, Rougemont Q, Normandeau E, Boyle B, Rochette R, Bernatchez L. 2019. Comparing Pool-seq, Rapture and GBS genotyping for inferring weak population structure: The American lobster (Homarus americanus) as a case study. Ecology & Evolution. 9:6606-6623.
446. Wellenreuther M, Mérot C, Berdan E, Bernatchez L. 2019. Going beyond SNPs: the role of structural genomic variants in adaptive evolution and species diversification. Molecular Ecology. 28 (6): 1203-1209.
445. Grummer JA, Beheregaray L, Bernatchez L, Hand, B, Luikart G, Narum SR, Taylor EB. Aquatic landscape genomics and environmental effects on genetic variation. Trends in Ecology & Evolution. 34(7): 641-654.
444. Gossieaux P, Bernatchez L, Sirois P, Garant D. 2019. Impacts of stocking and its intensity on effective population size in brook charr (Salvelinus fontinalis) populations. Conservation Genetics. 11:577–592.
443. Wellband K, Mérot C, Linnansaari T, Elliott AK, Curry RA, Bernatchez L. 2018. Chromosomal fusion and life history-associated genomic variation contribute to within-river local adaptation of Atlantic salmon. Molecular Ecology. 28 (6): 1439-1459.
442. Catanach Andrew, Deng Cecilia, David Charles, Bernatchez Louis, Wellenreuther Maren. 2019. The genomic pool of standing structural variation outnumbers single nucleotide polymorphism by more than three-fold in the marine teleost Chrysophrys auratus. Molecular Ecology. 28 (6): 1210-1223.
441. Morissette O, Sirois P, Wilson CC, Laporte M, Bernatchez L. 2019. The role of ecotype-environment interactions in intraspecific trophic niche partitioning subsequent to stocking. Ecological Applications. 29 (3): UNSP e01857
440. Xuereb A, D’Aloia CC, Daigle RM Andrello M, Dalongeville A, Manel S, Mouillot D, Guichard F, Côté IM, Curtis JMR, Bernatchez L, Fortin M-J. 2019. Marine Conservation and Marine Protected Areas. In Marjorie F. Oleksiak and Om P. Rajora (eds.), Population Genomics: Marine Organisms, Population Genomics [Om P. Rajora (Editor-in-Chief)], 1-24. https://doi.org/10.1007/13836_2018_63
439. Rougemont Q, Carrier A, Leluyer J, Ferchaud AL, Farrell J, Hatin D, Brodeur P, Bernatchez L.2019. Combining population genomics and forward simulations to investigate stocking impacts: A case study of Muskellunge (Esox masquinongy) from the St. Lawrence River basin. Evolutionary Applications. 5: 902-922.
438. Sutherland BJG, Prokkola JM, Audet C, Bernatchez L. 2019. Sex-specific co-expression networks and sex-biased gene expression in the salmonid Brook Charr Salvelinus fontinalis. G3. 9:955-968.
437. Wellenreuther M, Le Luyer J, Cook D, Ritchie PA, Bernatchez L. 2019. Domestication and temperature modulate gene expression signatures and growth in the Australasian snapper Chrysophrys auratus. G3. 9:105-116.
436. Lopez M, Benestan L, Moore JS, Perrier C, Gilbey J, Di Genova A, Maass A, Díaz D, Lhorente JP, Correa K, Neira R, Bernatchez L, Yáñez J. 2019. Comparing genomic signatures of domestication in two Atlantic salmon (Salmo salar L) populations with different geographical origins. Evolutionary Applications. 12:137–156.
435. Bernatchez S, Xuereb A, Laporte M, Benestan L, Steeves R, Laflamme M, Bernatchez L, Mallet M. Seascape genomics of eastern oyster (Crassostrea virginica) along the Atlantic coast of Canada. Evolutionary Applications. 12:587-609.
2018
434. Hendricks S, Anderson EC, Antao T, Bernatchez L, Forester BR, Garner B, Hand BK, Hohenlohe PA, Kardos M, Koop B, Sethuraman A, Waples RS, Luikart G. 2018. Recent advances in conservation and population genomics data analysis. Evolutionary Applications. 11:1197-1211.
433. Xuereb A, Kimber C, Curtis J, Bernatchez L, Fortin MJ. 2018. Putatively adaptive genetic variation in the Giant California sea cucumber (Parastichopus californicus) as revealed by environmental association analysis of RADseq data. Molecular Ecology. 27: 5035–5048.
432. Deiner K, Lopez J, Bourne S, Holman LE, Seymour M, Grey EK, Lacoursière-Roussel A, Li Y, Renshaw MA, Pfrender ME, Rius M, Bernatchez L, Lodge DM. 2018. Optimizing the detection of marine taxonomic richness using environmental DNA metabarcoding: the effects of filter material, pore size, and extraction method. Metabarcoding & Metagenomics. 2:1–15.
431. Cayuela H, Rougemont Q, Prunier JG, Moore JS, Clobert J, Besnard A, Bernatchez L. 2018. Towards a unified framework to study dispersal in wild populations using demographic and genetic approaches. Molecular Ecology. 27 (20), 3976–4010.
430. Ulmo-Díaz G, Casane D, Bernatchez L et al. 2018. Genetic differentiation in the mountainous star coral Orbicella faveolata around Cuba. Coral Reefs. 37: 1217-1227.
429. Brauer C, Unmack P, Smith S, Bernatchez L, Beheregaray L. 2018. On the roles of landscape heterogeneity and environmental variation in determining population genomic structure in a dendritic system. Molecular Ecology. 27 (17), 3484-3497.
428. Gossieaux P, Sirois P, Bernatchez L, Garant D. 2018. Impacts of introgressive hybridization between wild and domestic individuals on parasitism in Brook charr (Salvelinus fontinalis). Journal of Fish Biology. 93:664–673.
427. Lacoursière-Roussel A, Howland K, Normandeau E, Grey E, Archambault P, Deiner K, Lodge D, Hernandez C, Leduc N, Bernatchez L. 2018. eDNA metabarcoding as a new surveillance tool for coastal Arctic biodiversity. Ecology and Evolution. 8: 7763-7777.
426. Gaillard M, Pavey SA, Bernatchez L, Audet C. 2018. River-specific gene expression patterns associated with habitat selection for key hormones coding genes in American glass eels (Anguilla rostrata). Transactions of the American Fisheries Society. 147: 855-868.
425. Morissette O, Sirois P, Lester NP, Wilson CC, Bernatchez L. 2018. Supplementation stocking of Lake Trout (Salvelinus namaycush) in small boreal lakes: Ecotypes influence on growth and condition. PLoS ONE. 13(7): e0200599.
424. Wringe BF, McBride MC, Hamilton LC, Stanley RR, Bernatchez L, Clément M, Gilbey J, Sheehan TF, Bentzen P, Bradbury IR. 2018. Range-wide regional assignment of Atlantic salmon (Salmo salar) using genome wide single-nucleotide polymorphisms. Fisheries Research. 206:163-175.
423. Ferchaud AL, Laporte M, Perrier C, Bernatchez L. 2018. Impact of supplementation on deleterious mutations distribution in an exploited salmonid. Evolutionary Applications. 11:1053-1065.
422. Hunter ME, Hoban SM, Bruford MW, Segelbacher G, Bernatchez L. 2018. Next‐generation conservation genetics and biodiversity monitoring. Evolutionary Applications. 11:1029–1034.
421. Mérot C, Berdan E, Babin C, Normandeau E, Wellenreuther M, Bernatchez L. 2018. Intercontinental karyotype-environment parallelism supports a role for a chromosomal inversion in local adaptation in a seaweed fly. Proceedings of the Royal Society B: Biological Sciences. 285: 20180519.
420. Grey EK, Bernatchez L, Cassey P, Deiner K, Deveney M, Howland KL, Lacoursière-Roussel A, Leong SCY, Li Y, Olds B, Pfrender ME, Prowse T, Renshaw MA, Lodge DM. 2018. Effects of sampling effort on biodiversity patterns estimated from environmental DNA metabarcoding surveys. Scientific Reports. 8:8843.
419. Defo MA, Bernatchez L, Campbell PGC, Couture P. 2018. Temporal variations in kidney metal concentrations and their implications for retinoid metabolism and oxidative stress response in wild yellow perch (Perca flavescens). Aquatic Toxicology. 202: 26-35.
418. Wellenreuther M, Bernatchez L. 2018. Eco-evolutionary genomics of chromosomal inversions. Trends in Ecology and Evolution. 33 (6): 427-440.
417. Xuereb A, Benestan L, Normandeau E, Daigle RM, Curtis J, Bernatchez L, Fortin M-J. 2018. Asymmetric oceanographic processes mediate connectivity and population genetic structure as revealed by RADseq in a highly dispersive marine invertebrate (Parastichopus californicus). Molecular Ecology. 27:2347-2364.
416. Rougemont, Q. and Bernatchez, L. 2018. The demographic history of Atlantic salmon (Salmo salar) across its distribution range reconstructed from approximate Bayesian computations. Evolution. 72: 1261-1277.
415. Stanley RRE, DiBacco C, Lowen B, Beiko RG, Jeffery NW, Van Wyngaarden M, Bentzen P, Benestan L, Bernatchez L, Johnson C, Snelgrove PVR, Wringe BF, Bradbury IR. 2018. A climate-associated multi-species cryptic genetic cline in the northwest Atlantic. Science Advances.
414. Lecaudey LA, Schliewen U, Osinov A, Taylor E, Bernatchez L, Weiss S. 2018. Inferring phylogenetic structure, hybridization and divergence times within Salmoninae (Teleostei: Salmonidae) using RAD-sequencing. Molecular Phylogenetics and Evolution 124:82-99.
413. Sevellec M, Derome N, Bernatchez L. 2018. Holobionts and ecological speciation: the intestinal microbiota of Lake Whitefish species pairs. Microbiomes. 6:47.
412. Østbye K, Taugbøl A, Ravinet M, Harrod C, Pettersen RA, Bernatchez L, Vøllestad LA. 2018. Ongoing niche differentiation under high gene flow in a polymorphic brackish water threespine stickleback (Gasterosteus aculeatus) population. BMC Evolutionary Biology 18: 14.
411. Segherloo IH, Normandeau E, Benestan L, Rougeux C, Coté G, Moore J-S, Ghaedrahmati N, Bernatchez L. 2018. Evidence for ancient sympatric speciation in fish from subterranean habitats. Scientific Reports 8: Article Number: 2909
410. Dalziel AC, Laporte M, Guderley H, Bernatchez L. 2018. Do differences in the activities of carbohydrate metabolism enzymes between Lake Whitefish ecotypes match predictions from transcriptomic studies? Comparative Biochemistry and Physiology, Part B. 224:138-149.
409. Bernatchez L, Wellenreuther M. 2018. Synergistic Integration of Genomics and Ecoevolutionary Dynamics for Sustainable Fisheries: A Reply to Kuparinen and Uusi-Heikkilä. Trends in Ecology and Evolution. 33 (5): 308-310.
408. Rochette R, B Sainte-Marie, M Allain, J Baker, L Bernatchez, V Boudreau, M Comeau, J Côté, G Miron, L Ramsay, K Squires, JM Tremblay. 2018. The Lobster Node of the CFRN: Co‐constructed and collaborative research on productivity, stock structure and connectivity in the American lobster Homarus americanus. Canadian Journal of Fisheries and Aquatic Sciences. 75(5): 813-824.
407. Yannic G, Ortego J, Pellissier L, Lecomte N, Bernatchez L, Côté SD. 2018. Linking genetic and ecological differentiation in an ungulate with a circumpolar distribution. Ecography. 41: 922-937.
406. Létourneau J, Ferchaud A-L, Le Luyer J, Laporte M, Garant D, Bernatchez L. 2018. Predicting the genetic impact of stocking in Brook Charr (Salvelinus fontinalis) by combining RAD sequencing and modeling of explanatory variables. Evolutionary Applications. 11:577-592.
2017
405. Le Luyer J, Laporte M, Beacham TD, Kaukinen KH, Withler RE, Leong JS, Rondeau EB, Koop BF, Bernatchez L. 2017. Parallel epigenetic modifications induced by hatchery rearing in a Pacific Salmon. Proceedings of the National Academy of Sciences USA. 114: 12964–12969.
404. Jeffery NW, Stanley RRE, Wringe BF, Guijarro-Sabaniel J, Bourret V, Bernatchez L, Bentzen P, Beiko RG, Gilbey J, Clément M, Bradbury IR.2017. Range-wide parallel climate-associated genomic clines in Atlantic salmon. Royal Society Open Science. 4: 171394.
403. Carrier A, Ferchaud A-L, Le Luyer J, Hatin D, Farrell J, Brodeur P, Bernatchez L. 2017. Population Genomics towards Optimizing Muskellunge Management and Conservation in Québec, Canada. American Fisheries Society Symposium 85:467–471.
402. Moore J-S, Harris L, Le Luyer J, Sutherland B, Rougemont Q, Tallman R, Fisk A, Bernatchez L. 2017. Genomics and telemetry suggest a role for migration harshness in determining overwintering habitat choice, but not gene flow, in anadromous Arctic Char. Molecular Ecology 26: 6784-6800.
401. Babin C, Gagnaire P-A, Pavey Sa, Bernatchez L. 2017. RAD-Seq reveals patterns of additive polygenic variation caused by spatially-varying selection in the American Eel (Anguilla rostrata). Genome Biology and Evolution. 9: 2974–2986.
400. Perrier C, Ferchaud A-L, Sirois P, Thibault I, Bernatchez L. 2017. Do tremendous genetic drift and accumulation of deleterious mutations preclude adaptation to temperature in a northern lacustrine fish? Molecular Ecology 26: 6317–6335.
399. Deiner K, Bik H, Mächler E, Seymour M, Lacoursière-Roussel A, Altermatt F, Creer S, Bista I, Lodge D, de Vere N, Pfrender M, Bernatchez L. 2017. Environmental DNA metabarcoding: transforming how we survey animal and plant communities. Molecular Ecology 26: 5872–5895.
398. Benestan L, Moore J-S, Sutherland BJG, Le Luyer J, Maaroufi H, Rougeux C, Normandeau E, Rycroft N, Atema J, Harris LN, Tallman RF, Greenwood SJ, Clark KF, Bernatchez L. 2017. Sex matters in Massive Parallel Sequencing: evidence for biases in genetic parameter estimation and investigation of sex determination systems. Molecular Ecology 26: 6767-6783.
397. Ulmo-Díaz G, Hurtadob A, Le Luyer J, García-Machado E, Bernatchez L. 2017. The complete mitochondrial DNA of the Cuban gar (Atractosteus tristoechus). Mitochondrial DNA Part B: Resources. 2: 359–360.
396. Rougeux C, Bernatchez L, Gagnaire P-A. 2017. Modelling the multiple facets of speciation-with-gene-flow towards improving divergence history inference of a recent fish adaptive radiation. Genome Biology and Evolution. 9: 2057-2074.
395. Bernatchez L, Wellenreuther M, Araneda C, Ashton DT, Barth JMI, Beacham TD, Maes GE, Martinsohn JTh, Miller KM, Naish K, Ovenden JR, Primmer CR, Suk HY, Therkildsen NO, Withler RE. 2017. Harnessing the power of genomics to secure the future of seafood. Trends in Ecology and Evolution. 32: 665-680.
394. Sutherland BJG, Rico C, Audet C, Bernatchez L. 2017. Sex chromosome evolution, heterochiasmy and physiological QTL in the salmonid Brook Charr Salvelinus fontinalis. G3. 7: 2763-2778.
393. Rico C, Cuesta JA, Drake P, Macpherson E, Bernatchez L, Marie AD. 2017. Null alleles are ubiquitous at microsatellite loci in the Wedge Clam (Donax trunculus). PeerJ. 5:e3188.
392. Macqueen DJ, Primmer CR, Houston RD, Nowak BF, Bernatchez L, and 30 co-authors. 2017 Functional Analysis of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture. BMC Genomics 18:484.
391. Kusche H, Côté G, Hernandez C, Normandeau E, Boivin-Delisle D, Bernatchez L. 2017 Characterization of natural variation in North American Atlantic Salmon populations (Salmonidae: Salmo salar) at a locus with a major effect on sea age. Ecology and Evolution. 7: 5797-5807.
390. Catchen JM, Hohenlohe PA, Bernatchez L, Funk WC, Andrews KR, Allendorf FW. 2017. Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations. Molecular Ecology Resources 17: 362–365.
389. Gates K, Sandoval-Castillo J, Bernatchez L, Beheregaray L. 2017. De novo transcriptome assembly and annotation for the desert rainbowfish (Melanotaenia splendida tatei) with comparison with candidate genes for future climates. Marine Genomics 35: 63-68.
388. Crespel A, Dupont-Prinet A, Bernatchez L, Claireaux G, Tremblay R, Audet C. 2017. Divergence in physiological factors affecting migratory performance between anadromous and resident populations of brook charr Salvelinus fontinalis. Journal of Fish Biology. 90, 2170–2193.
387. Symonová R, Majtánová Z, Arias-Rodriguez L, Mořkovský L, Kořínková T, Cavin L, Johnson Pokorná M, Doležálková M, Flajšhans M, Normandeau E, Ráb P, Meyer A, Bernatchez L. 2017. Genome Compositional Organization in Gars Shows More Similarities to Mammals than to Other Ray-Finned Fish. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution 7SI: 607-619.
386. Pavey SA, Laporte M, Normandeau E, Gaudin J, Létourneau L, Boivert S, Corbeil J, Audet C, Bernatchez L. 2017. Draft genome of the American Eel (Anguilla rostrata). Molecular Ecology Resources. 17, 806–811.
385. Narum SR, Gallardo P, Correa C, Matala A, Hasselman D, Sutherland BJG, Bernatchez L. 2017. Genomic patterns of diversity and divergence of two introduced salmonid species in Patagonia, South America. Evolutionary Applications. 10: 402-416.
384. Bay R, Rose N, Barrett R, Bernatchez L, Ghalambour C, Lasky J, Brem R, Palumbi S, Ralph P. 2017. Predicting Responses to Contemporary Environmental Change Using Evolutionary Response Architectures. The American Naturalist. 189: 463–473.
383. Dion-Côté A-M, Symonová R, Lamaze FC, Pelikánová Š, Ráb P, Bernatchez L. 2017. Standing chromosomal variation associated with rapid divergence in Lake Whitefish species pairs: the role of historical contingency and relevance for speciation. Molecular Ecology. 26:178–192.
382. Perreault-Payette A, Muir AM, Goetz F, Sirois P, Perrier C, Normandeau E, Bernatchez L. 2017. Investigating the extent of parallelism in morphological and genomic divergence among lake trout ecotypes in Lake Superior. Molecular Ecology. 26: 1477–1497.
381. Hashemzadeh Segherloo I, Abdoli A, Eagderi S, Reza Esmaeili H, Sayyadzadeh G, Bernatchez L, Hallerman E, Geiger MF, Özulug M, Freyhof J. 2017. Dressing down: Convergent reduction of the mental disc in the labeonin genera (Teleostei: Cyprinidae) in the Middle East. Hydrobiology. 785: 47–59.
380. Dalziel AC, Laporte M, Rougeux C, Guderley H, Bernatchez L. 2017. Convergence in organ size but not energy metabolism enzyme activities among wild Lake Whitefish (Coregonus clupeaformis) species-pairs. Molecular Ecology 26: 225-244.
2016
379. Sutherland BJG, Gosselin T, Normandeau E, Lamothe M, Isabel N, Audet C, Bernatchez L. 2016 Salmonid chromosome evolution as revealed by a novel method for comparing RADseq linkage maps. Genome Biology and Evolution. 8: 3600-3617.
378. Marie AD, Lejeusne C, Karapatsiou E, Cuesta JA, Drake P, Macpherson E, Bernatchez L, Rico C. Implications for management and conservation of the population genetic structure of the wedge clam Donax trunculus across two biogeographic boundaries. Scientific Reports. 6: 39152.
377. Lacoursière-Roussel A, Dubois Y, Bernatchez L. 2016. Improving herpetological surveys in eastern North America using the environmental DNA method. Genome. 59: 991-1007.
376. Lacoursière-Roussel A, Rosabal M, Bernatchez L. 2016. Estimating fish abundance and biomass from eDNA concentrations: variability among capture methods and environmental conditions. Molecular Ecology Resources. 16: 1401–1414.
375. Benestan L, Quinn BK, Maaroufi H, Laporte M, Rochette R, Bernatchez L. 2016. Seascape genomics provides evidence for thermal adaptation and current-mediated population structure in American lobster (Homarus americanus). Molecular Ecology 25: 5073–5092.
374. Bernatchez S, Laporte M, Perrier C, Sirois P, Bernatchez L. 2016. Investigating genomic and phenotypic parallelism between piscivorous and planktivorous ecotypes of Lake Trout (Salvelinus namaycush) by means of RADseq and morphometrics analyses. Molecular Ecology. 25: 4773-4792.
373. Bernatchez L. 2016. On the maintenance of genetic variation and adaptation to environmental change: considerations from population genomics in fishes. Journal of Fish Biology. 89: 2519–2556.
372. Laporte M, Dalziel AC, Martin N, Bernatchez L. 2016. Adaptation and acclimation of traits associated with the evolution of swimming activity in Lake Whitefish ecotypes (Coregonus clupeaformis). BMC Evolutionary Biology 16:160.
371. Ferchaud A-L, Perrier C, April J, Hernandez C, Dionne M, Bernatchez L. 2016. Making sense of the relationships between Ne, Nb and Nc towards defining conservation thresholds in Atlantic salmon (Salmo salar). Heredity. (2016) 117, 268–278.
370. Moore J-S, Harris LN, Kessel ST, Bernatchez L, Tallman RF, Fisk AT. 2016. Moore J-S, Harris LN, Kessel ST, Bernatchez L, Tallman RF, Fisk AT. 2016. Preference for nearshore and estuarine habitats in anadromous Arctic char (Salvelinus alpinus) from the Canadian high Arctic (Victoria Island, Nunavut) revealed by acoustic telemetry. Canadian Journal of Fisheries and Aquatic Sciences. 73: 1434–1445.
369. Bradbury IR, Hamilton LC, Sheehan TF, Chaput G, Robertson MJ, Dempson JB, Reddin D, Morris V, King T, Bernatchez L. 2016. Genetic mixed stock analysis disentangles spatial and temporal variation in composition of the West Greenland Atlantic Salmon fishery. ICES Journal of Marine Science. 73: 2311-2321.
368. Grasset J, Ollivier É, Bougas B, Yannic G, Campbel PG, Bernatchez L, Couture P. 2016. Combined effects of temperature changes and metal contamination at different levels of biological organization in yellow perch. Aquatic Toxicology. 177: 324-332.
367. Garner BA, Hand BK, Amish SJ, Bernatchez L, Foster JT, Miller KM, Morin PA, Narum SR, O’Brien SJ, et al. 2016. Genomics in Conservation: Case Studies and Bridging the Gap between Data and Application. Trends in Ecology and Evolution 31: 81-83.
366. Baillon L, Pierron F, Pannetier P, Normandeau E, Couture P, Labadie P, Budzinski H, Lambert P, Bernatchez L, Baudrimont M. 2016. Gene transcription profiling in wild and laboratory-exposed eels: Effect of captivity and in situ chronic exposure to pollution. Science of the Total Environment 571: 92–102.
365. Hernández D, Casane D, Chevalier-Monteagudo P, Bernatchez L, Garcia-Machado E. 2016. Go West: A one way stepping-stone model of dispersion of the cavefish Lucifuga dentata through western Cuba. PlosOne. 11(4): e0153545
364. Bougas B, Normandeau E, Grasset J, Defo M, Campbell P, Couture P, Bernatchez L. 2016. Transcriptional response of yellow perch to changes in ambient metal concentrations - a reciprocal field transplantation experiment. Aquatic Toxicology. 173:132-142.
363. Yannic G, St-Laurent M-H, Ortego J, Taillon J, Beauchemin A, Bernatchez L, Dussault C, Côté SD. 2016. Integrating ecological and genetic structure to define management units for caribou in Eastern Canada. Conservation Genetics 17:437–453
362. Yáñez J, Naswa S, López M, Bassini L, Correa K, Gilbey J, Bernatchez L, Norris A, Neira R, Lhorente J, Schnable P, Newman S, Mileham A, Deeb N, Di Genova A, Maass A. 2016. Genome-wide single nucleotide polymorphism (SNP) discovery in Atlantic salmon (Salmo salar): validation in wild and farmed American and European populations. Molecular Ecology Resources. 17: 437-453.
361. Chebib J, Renaut S, Bernatchez L, Rogers SM. 2016. Genetic structure and within-generation genome scan analysis of fisheries-induced evolution in a lake whitefish (Coregonus clupeaformis) population. Conservation Genetics. 17:473–483.
360. Gaillard M, Pavey S, Côté CL, Tremblay R, Bernatchez L, Audet C. 2016. Regional variation of gene regulation associated with storage lipid metabolism in American glass eels (Anguilla rostrata) Comparative Biochemistry and Physiology: part A. 196 30–37.
359. McCairns JS, Smith S, Sasaki M, Bernatchez L., Beheregaray LB. 2016. The adaptive potential of subtropical rainbowfish in the face of climate change: heritability and heritable plasticity for the expression of candidate genes. Evolutionary Applications. 9: 531–545.
358. Lacoursière-Roussel A, Côté G, Leclerc V, Bernatchez L. 2016. Quantifying relative fish abundance with eDNA: a promising tool for fisheries management. Journal of Applied Ecology. 53: 1148-1157.
357. Baillon L, Pierron F, Oses J, Pannetier P, Normandeau E, Couture P, Labadie P, Budzinski H, Lambert P, Bernatchez L, Baudrimont M. 2015. Detecting the exposure to Cd and PCBs by means of a non-invasive transcriptomic approach in laboratory- and wild-contaminated European eels (Anguilla anguilla). Environmental Science and Pollution Research 23: 5431-5441.
356. Jacobsen M, da Fonseca R, Bernatchez L, Hansen M. 2016. Comparative analysis of complete mitochondrial genomes suggests that relaxed purifying selection is driving high nonsynonymous evolutionary rate of the NADH2 gene in whitefish (Coregonus ssp.). Molecular Phylogenetics and Evolution 95: 161-170.
355. Perrier C, April J, Côté G, Bernatchez L, Dionne M. 2016. Effective number of breeders in relation to census size as management tools for Atlantic salmon conservation in a context of stocked populations. Conservation Genetics. 17: 31-44.
354. Bradbury I, Hamilton LC, Chaput G, Robertson MJ, Goraguer H, Walsh A, Morris V, Reddin D, Dempson B, Sheehan TF, King T, Bernatchez L. 2016. Genetic mixed stock analysis of an interceptory Atlantic Salmon fishery in the Northwest Atlantic. Fisheries Research. 174: 234-244.
353. Jensen JD, Foll M, Bernatchez L. 2016. The past, present and future of genomic scans for selection: Introduction. Molecular Ecology 25: 1-4.
352. Laporte M, Pavey SA, Rougeux C, Pierron F, Lauzent M, Budzinski H, Labadie P, Geneste E, Couture P, Baudrimont M, Bernatchez L. 2016. RAD-sequencing reveals within-generation polygenic selection in response to anthropogenic organic and metal contamination in North Atlantic Eels. Molecular Ecology. 25: 219-237.
2015
351. Bradbury I, Hamilton L, Dempson J, Robertson M, Bourret V, Bernatchez L, Verspoor E. 2015. Transatlantic secondary contact in Atlantic salmon, comparing microsatellites, a SNP array, and Restriction Associated DNA sequencing for the resolution. Molecular Ecology. 24: 5130-5144.
350. Dalziel AC, Martin N, Laporte M, Guderley H, Bernatchez L. 2015. Acclimation and adaptation of aerobic exercise physiology in Lake Whitefish ecotype (Coregonus clupeaformis). Evolution. 69: 2167-2186.
349. Pujolar JM, Jacobsen MW, Bekkevold D, Lobón-Cervià J, Jónsson B, Bernatchez L, Hansen MM. 2015 Signatures of selection between life cycle stages separated by metamorphosis in the European eel. BMC Genomics. 16: 600.
348. Stepien CA, Behrmann-Godel J, Bernatchez L. 2015. Evolutionary Relationships, Population Genetics, and Ecological and Genomic Adaptations of Perch (Perca). In: Chapter 2. 7-46. Biology of Perch, P. Couture and G. Pyle, Editors. CRC Press, Boca Raton, Fl.
347. Baillon L, Oses J, Pierron F, du Colombier SB, Caron A, Normandeau E, Lambert P, Couture P, Labadie P, Budzinski H, Dufour S, Bernatchez L, Baudrimont M. 2015. Gonadal transcriptome analysis of wild contaminated female European eels during artificial gonad maturation. Chemosphere. 139: 303-309.
346. Laporte M, Rogers SM, Dion-Côté A-M, Normandeau E, Gagnaire P-A, Dalziel AC, Chebib J, Bernatchez L. RAD‐QTL mapping reveals both genome‐level parallelism and different genetic architecture underlying the evolution of body shape in Lake Whitefish (Coregonus clupeaformis) species pairs. G3. 5: 1481-1491.
345. Gaillard M, Tremblay R, Bernatchez L, Audet C. 2015. Regional variation in energy storage strategies in American glass eels from Eastern Canada. Comparative Biochemistry and Physiology: part A. 188 (2015) 87-95.
344. Benestan L, Gosselin T, Perrier C, Rochette R, Bernatchez L. 2015. RAD-genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species. Molecular Ecology. 24: 3299–3315.
343. Pavey SA, Gaudin J, Normandeau E, Dionne M, Castonguay M, Audet C, Bernatchez L. 2015. RAD Sequencing Highlights Polygenic Discrimination of Habitat Ecotypes in the Panmictic American Eel. (Anguilla rostrata). Current Biology. 25: 1666–1671.
342. Azizishirazi A, Dew W, Bougas B, Bernatchez L, Pyle G. 2015. Dietary sodium protects fish against copper-induced olfactory impairment. Aquatic Toxicology. 161: 1-9.
341. Bradbury IR, Hamilton LC, Rafferty S, Meerburg D, Poole R, Dempson JB, Robertson MJ, Reddin DG, Bourret V, Dionne M, Chaput G, Sheehan TF, King TL, Bernatchez L. 2015. Genetic evidence of local exploitation of Atlantic salmon in a coastal subsistence fishery in the Northwest Atlantic. Canadian Journal of Fisheries and Aquatic Sciences. 72: 83-95.
340. Baillon L, Pierron F, Coudret R, Normandeau E, Caron A, Peluhet L, Labadie P, Budzinski H, Durrieu G, Sarraco J, Elie, Couture P, Baudrimont M, Bernatchez L. 2015. Transcriptome profile analysis reveals specific signatures of pollutants in Atlantic eels. Ecotoxicology. 24: 71-84.
339. Côté CL, Pavey SA, Stacey JA, Pratt TC, Castonguay M, Audet C, Bernatchez L. 2015. Growth, female bimodality and sex ratio variability in American Eel (Anguilla rostrata) of different origins in both controlled conditions and the wild: Implications for stocking programs. Transactions of the American Fisheries Society. 44: 246-257.
338. Defo M, Bernatchez L, Campbell PGC, Couture P. 2015. Transcriptional and biochemical markers in transplanted Perca flavescens to characterize cadmium- and copper-induced oxidative stress in the field. Aquatic Toxocology. 162: 39-53.
337. Mee, JA, Bernatchez L, Reist JD, Rogers SM, Taylor EB. 2015. Identifying designatable units for intraspecific conservation prioritization: a hierarchical approach applied to the Lake Whitefish species complex (Coregonus spp.). Evolutionary Applications. 8: 423-441.
336. Dion-Côté A-M, Symonová R, Ráb P, Bernatchez L. 2015. Reproductive isolation in a nascent species pair is associated with aneuploidy in hybrid offspring. Proceedings of the Royal Society B: Biological Sciences. 282: 20142862.
335. Boivin B, Castonguay M, Audet C, Pavey S, Dionne M, Bernatchez L. 2015. How does salinity influence habitat selection and growth in juvenile American eels Anguilla rostrata? Journal of Fish Biology. 86: 765-784.
334. Le Cam S, Perrier C, Bernard AL, Bernatchez L, Evanno G. 2015. Genetic and phenotypic changes in an Atlantic salmon population supplemented with non-local individuals: a longitudinal study over 21 years. Proceedings of the Royal Society B: Biological Sciences. 282: 20142765.
2014
333. Ouellet-Cauchon G, Mingelbier M, Lecomte F, Bernatchez L. 2014. Landscape variability explains spatial pattern of population structure of northern pike (Esox lucius) in a large fluvial system. Ecology and Evolution. 4: 3723-3735.
332. Moore J-S, Bourret V, Dionne M, Bradbury I, O’Reilly P, Kent M, Chaput G, Bernatchez L. 2014 Conservation genomics of anadromous Atlantic salmon across its North American range: outlier loci identify the same patterns of population structure as neutral loci. Molecular Ecology. 23: 5680-5697.
331. Boutin S, Sauvage C, Bernatchez L, Audet C, Derome N. 2014. Inter Individual Variations of the Fish Skin Microbiota: Host Genetics Basis of Mutualism? PlosOne 9 (7): e102649.
330. Torterotot J-B, Perrier C, Bergeron NE, Bernatchez L. 2014. Influence of forest road culverts and waterfalls on the fine scale distribution of brook trout genetic diversity in a boreal watershed. Transactions of the American Fisheries Society. 143 (6):1577-1591.
329. Yannic G, Pellissier L, Le Corre M, Dussault C, Bernatchez L, Côté SD. 2014. Temporally dynamic habitat suitability predicts genetic relatedness among caribou. Proceedings of the Royal Society of London B. 281: Article Number: 20140502
328. Jacobsen MW, Pujolar JM, Bernatchez L, Munch K, Jian J, Niu Y, Hansen MM. 2014. Genomic footprints of speciation in Atlantic eels (Anguilla anguilla and A. rostrata). Molecular Ecology. 23: 4785-4798.
327. Fraser DJ, Debes P, Bernatchez L, Hutchings JA. 2014. Population size, habitat fragmentation, and the nature of adaptive variation in a stream fish. Proceedings of the Royal Society of London B. 281: Article Number: 20140370.
326. Grasset J, Bougas B, Campbell PGC, Bernatchez L. 2014. Temperature, oxygen and diet modulate gene transcription and metabolic capacities in yellow perch. Canadian Journal of Fisheries and Aquatic Sciences. 71: 1635-1641.
325. Richard A, Bernatchez L, Valiquette E, Dionne M. 2014. Telemetry reveals how catch and release affects prespawning migration in Atlantic salmon (Salmo salar L.). Canadian Journal of Fisheries and Aquatic Sciences. 71: 1730-1739.
324. Jacobsen M, Pujolar JM, Gilbert T, Moreno-Mayar JV, Bernatchez L, Als T, Lobon-Cervia J, Hansen MM. 2014. Speciation and demographic history of Atlantic eels (Anguilla anguilla and A. rostrata) revealed by mitogenome sequencing. Heredity. 113: 432-442.
323. Bourret V, Dionne M, Bernatchez L. 2014. Detecting genotypic changes associated with selective mortality at sea in Atlantic salmon: polygenic multilocus analysis surpasses genome scan. Molecular Ecology. 23: 4444-4457.
322. Perrier C, Normandeau E, Richard A, Dionne M, Bernatchez L. Alternative reproductive tactics increase effective population size and decrease inbreeding in wild Atlantic salmon. Evolutionary Applications. 7: 1094-1106.
321. Houde M, Maeva G, Douville M, Bougas B, Couture P, DeSilva AO, Spencer C, Lair S, Bernatchez L, Gagnon C. 2014. A multi-level biological approach to evaluate impacts of a major municipal effluent in wild St. Lawrence River yellow perch (Perca flavescens). Science of the Total Environment. 497–498: 307-318.
320. Evans ML, Præbel K, Peruzzi S, Amundsen P-A, Bernatchez L. 2014. Phenotype-environment association of the oxygen transport system in trimorphic European whitefish (Coregonus lavaretus) populations. Evolution. 68: 2197–2210.
319. Côté CL, Castonguay M, Svetlana McWilliam K, Cramb G, Bernatchez L. 2014. In absence of local adaptation, plasticity and spatially varying selection rule: a view from genomic reaction norms in a panmictic species (Anguilla rostrata). BMC Genomics. 15: 403.
318. Pujolar JM, Jacobsen MW, Als TD, Frydenberg J, Munch K, Jónsson B, Jiang X, Cheng L, Maes GE, Bernatchez L, Hansen MM. 2014. Genome-wide single-generation signatures of local selection in the panmictic European eel. Molecular Ecology. 23: 2514–2528.
317. Azizishirazi A, Dew WA, Bougas B, Dashtban M, Bernatchez L, Pyle G. 2014. Chemosensory mediated behaviours and gene transcription profiles in wild yellow perch (Perca flavescens) from metal contaminated lakes. Ecotoxicology and Environmental Safety. 106: 239-245.
316. Boutin S, Sauvage C, Bernatchez L, Audet C, Derome N. 2014. Inter individual variations of the fish skin microbiota: host genetics basis of mutualism? PlosOne. 9: e102649.
315. Ulrik MG, Pujolar JM, Ferchaud AL, Jacobsen MW, Als TD, Gagnaire PA, Frydenberg J, Bøcher PK, Jónsson B, Bernatchez L, Hansen MM. 2014. Do North Atlantic Eels show parallel patterns of spatially varying selection? Journal of Evolutionary Biology. 14: 138.
314. Valiquette E, Perrier C, Thibault I, Bernatchez L. 2014. Loss of genetic integrity in wild lake trout populations following stocking: Insights from an exhaustive study of 72 lakes from Québec, Canada. Evolutionary Applications. 7: 625-644.
313. Defo M, Bernatchez L, Campbell PCG, Couture P. 2014. Waterborne cadmium and nickel impact oxidative stress responses and retinoid metabolism in yellow perch. Aquatic Toxicology. 154: 207-220.
312. Sevellec M, Pavey S, Boutin S, Filteau M, Adam W, Derome N, Bernatchez L. 2014. Microbiome investigation in the ecological speciation context of lake whitefish (Coregonus clupeaformis) using next-generation sequencing. Journal of Evolutionary Biology. 27: 1029–1046.
311. Ouellet-Cauchon G, Normandeau E, Mingelbier M, Bernatchez L. 2014. EST-based microsatellites for northern pike (Esox lucius) and cross-amplification across all Esox species. Conservation Genetics Resources 6: 451-454..
310. Pujolar JM, Jacobsen MW, Als TD, Frydenberg J, Magnussen E, Bekkevold D, Maes G, Bernatchez L, Hansen MM. 2014. Assessing patterns of hybridization between North Atlantic Eels using diagnostic single nucleotide polymorphisms. Heredity. 112: 627–637.
309. Dion-Côté A-M, Renaut S, Normandeau E, Bernatchez L. 2014. RNA-seq reveals transcriptomic shock involving transposable elements reactivation in hybrids of young lake whitefish species. Molecular Biology and Evolution. 31:1188–1199.
308. Lamaze FC, Pavey SA, Normandeau E, Roy G, Garant D, Bernatchez L. 2014. Neutral and selective processes shape MHC gene diversity and expression in stocked brook charr populations (Salvelinus fontinalis). Molecular Ecology. 23:1730-1748.
307. Bhat S, Amundsen P-A, Knudsen R, Gjelland, ØK, Fevolden S-E, Bernatchez L, Præbel K.. 2014. Speciation reversal in European whitefish (Coregonus lavaretus (L.)) caused by competitor invasion. PlosOne. 9: e91208.
306. Meier K, Hansen MM, Normandeau É, Mensberg K-L, Frydenberg J, Larsen P, Bekkevold D, Bernatchez L. 2014. Local adaptation at the transcriptome level in brown trout: evidence from early life history temperature genomic reaction norms. PlosOne. 9: e85171.
305. Yannic G, Pellissier L, Ortego J, Couturier S, Cuyler C, Dussault C, Hundertmark KJ, Irvine RJ, Jenkins DA, Kolpashikov L, Lecomte N, Mager K, Musiani M, Parker KL, Røed KH, Sipko T, Þórisson SG, Weckworth BV, Guisan A, Bernatchez L, Côté SD. 2014. Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4: 132-137.
2013
304. Boutin S, Bernatchez L, Audet C, Derome N. Network analysis highlights complex interactions between pathogen, host and commensal microbiota. PlosOne. 8: e84772
303. Wahle RA, Battison A, Bernatchez L, Boudreau S, Castro K, Grabowski JH, Greenwood SJ, Guenther C, Rochette R, J Wilson. 2013. The American Lobster in a Changing Ecosystem: A US–Canada Science Symposium, 27–30 November 2012, Portland, Maine. Canadian Journal of Fisheries and Aquatic Sciences. 70: 1571–1575.
302. Rico R, Normandeau E, Dion-Côté A-M, Rico MI, Côté G, Bernatchez L. Combining next-generation sequencing and online databases for microsatellite development in non-model organisms. Scientific Reports. 3: 3376
301. Fraser DJ, Calvert AM, Bernatchez L, Coon. Multidisciplinary population monitoring when demographic data are sparse: a case study of remote trout populations. Ecology and Evolution. 3: 4954–4969.
300. Bourret V, Dionne M, Kent MP, Lien S, Bernatchez L. 2013. Landscape Genomics in Atlantic Salmon (Salmo salar): searching for gene-environment interactions driving local adaptation. Evolution. 67: 3469-3487
299. Perrier C, Bourret V, Kent M, Bernatchez L. 2013. Parallel and non-parallel genome-wide divergence among replicate population pairs of freshwater and anadromous Atlantic salmon. Molecular Ecology. 22: 5577-5593.
298. Hébert F-O, Renaut S, Bernatchez L. 2013. Targeted sequence capture and resequencing implies a predominant role of regulatory regions in the divergence of a sympatric lake whitefish species pair (Coregonus clupeaformis). Molecular Ecology 22: 4896–4914.
297. Bougas B, Normandeau E, Pierron F, Campbell PGC, Bernatchez L. Couture P. 2013. How does exposure to nickel and cadmium affect the transcriptome of yellow perch (Perca flavescens) – results from a 1000 candidate-gene microarray. Aquatic Ecotoxicology. 142-143: 355-364.
296. Blanchet S, Reyjol Y, April J, Mandrak N, Rodriguez M, Bernatchez L, Magnan P. 2013. Phenotypic and phylogenetic correlates of geographic range size in Canadian freshwater fishes. Global Ecology and Biogeography. 22: 1083-1094.
295. Gagnaire P-A, Pavey, SA, Normandeau E, Bernatchez L. 2013. The genetic architecture of reproductive isolation during speciation-with-gene-flow in lake whitefish species pairs assessed by RAD-sequencing. Evolution. 67:2483-2497.
294. April J, Hanner R, Mayden R, Bernatchez L. 2013. Metabolic rate and climatic fluctuations shape continental wide pattern of genetic divergence and biodiversity in fishes. PlosOne. 8: e70296
293. Neville H, Bernatchez L. 2013. Coding Gene Single Nucleotide Polymorphism Population Genetics of Nonnative Brook Trout: The Ghost of Introductions Past Transactions of the American Fisheries Society. 142: 1215-1231.
292. Pavey SA, Sevellec M, Adam W, Normandeau E, Lamaze FC, Gagnaire P-A, Filteau M, Gagnon-Hébert F-O, Maaroufi H, Bernatchez L. 2013. Nonparallelism in MHC IIβ diversity accompanies nonparallelism in pathogen infection of lake whitefish (Coregonus clupeaformis) species pairs as revealed by next-generation sequencing. Molecular Ecology. 22: 3833–3849.
291. Bélanger-Deschênes S, Couture P, Campbell PGC, Bernatchez L. 2013. Evolutionary change driven by metal exposure as revealed by coding SNP genome scan in wild yellow perch (Perca flavescens). Ecotoxicology. 22: 938-957.
290. Smith S, Bernatchez L, Beheregaray LB. 2013. RNA-seq analysis reveals extensive transcriptional plasticity to temperature stress in a freshwater fish species. BMC Genomics. 14: 375.
289. Rose A, Bernatchez L, Bonin A, Buerkle CA, Carstens B, Emerson B, Garant D, Giraud T, Kane N, Rogers S, Slate J, Smith H, Sork V, Stone G, Waits L, Widmer A, Rieseberg L. 2013. A Roadmap for Molecular Ecology. Molecular Ecology. 22: 2605–2626.
288. Gagnaire P-A, Normandeau E, Pavey SA,Bernatchez L. 2013. Mapping phenotypic, expression and transmission ratio distortion QTL using RAD markers in the Lake Whitefish (Coregonus clupeaformis). Molecular Ecology. 22: 3036–3048.
287. Filteau M, Pavey SA, St-Cyr J, Bernatchez L. 2013. Gene Coexpression Networks Reveal Key Drivers of Phenotypic Divergence in Lake Whitefish. Molecular Biology and Evolution. Molecular Biology and Evolution 30: 1384–1396.
286. Crespel A, Bernatchez L, Garant D, Audet C. 2013. Genetically based population divergence in overwintering energy mobilization in brook charr (Salvelinus fontinalis). Genetica. 141: 51–64.
285. Bougas B, Audet C, Bernatchez L. 2013. The influence of parental effects on transcriptomic landscape during early development in brook charr (Salvelinus fontinalis, Mitchill). Heredity. 110: 484-491.
284. Bougas B, Normandeau E, Audet C, Bernatchez L. 2013. Linking transcriptomic and genomic variation to growth in brook charr hybrids (Salvelinus fontinalis, Mitchill). Heredity. 110: 492-500.
283. Crespel A, Bernatchez L, Audet C, Garant D. 2013. Strain specific genotype-environment interactions and evolutionary potential for body mass in brook charr (Salvelinus fontinalis). G3: Genes, genomes, genetics. 3: 379-385
282. Evans ML, Chapman LJ, Mitrofanov I, Bernatchez L. 2013. Variable extent of parallelism in respiratory, circulatory, and neurological traits across lake whitefish species pairs. Ecology and Evolution. 3: 546-557.
281. Côté CL, Gagnaire P-A, Bourret V, Verreault G, Castonguay M, Bernatchez L. Population genetics of the American eel (Anguilla rostrata): Fst = 0 and North Atlantic Oscillation effects on demographic fluctuations of a panmictic species. 2013. Molecular Ecology. 22: 1763-1776.
280. Lamaze FC, Garant D, Bernatchez L. 2013. Stocking impacts the expression of candidate genes and physiological condition in introgressed brook charr (Salvelinus fontinalis) populations. Evolutionary Applications. 6: 393-407.
279. Richard A, Dionne M, Wang J, Bernatchez L. 2013. Does catch and release affect the mating system and individual reproductive success of wild Atlantic salmon (Salmo salar L.)? Molecular Ecology. 22: 187-200.
278. April J, Hanner RH, Dion-Côté A-M, Bernatchez L. 2013. Glacial cycles as an allopatric speciation pump in North-Eastern American freshwater fishes. Molecular Ecology. 22: 409-422.
277. Bourret V, Kent MP, Primmer CR, Vasemagi A, Karlsson S, Hindar K, McGinnity P, Verspoor E, Bernatchez L, Lien S. 2013. SNP-array reveals genome-wide patterns of geographical and potential adaptive divergence across the natural range of Atlantic salmon (Salmo salar). Molecular Ecology. 22: 532-551.
276. Milot E, Perrier C, Papillon L, Dodson JJ, Bernatchez L. 2013. Reduced fitness of Atlantic salmon released in the wild after one generation of captive-breeding. Evolutionary Applications. 6: 472-485.
2012
275. Klepaker T, Østbye K, Bernatchez L, Vøllestad LA. 2012. Spatio-temporal patterns in pelvic reduction in threespine stickleback (Gasterosteus aculeatus L.) in Lake Storvatnet. Evolutionary Ecology Research. 14: 169–191.
274. Defo M, Pierron F, Spear PA, Bernatchez L, Campbell PGC, Couture P. 2012. Evidence for metabolic imbalance of vitamin A₂ in wild fish chronically exposed to metals. Ecotoxicology and Environmental Safety. 85: 88-95.
273. Pavey S, Bernatchez L, Aubin-Horth N, Landry C. 2012. What is needed for next-generation ecological and evolutionary genomics? Trends in Ecology and Evolution. 27: 673-678.
272. Gagnaire P-A, Normandeau E, Bernatchez L. 2012. Comparative genomics reveals adaptive protein evolution and a possible cytonuclear incompatibility between European and American eels. Molecular Biology and Evolution. 29: 2909-2919.
271. Segherloo H, Bernatchez L, Golzarianpour K, Abdoli A, Primmer CR, Bakhtiary M. 2012. Genetic differentiation between two sympatric morphs of the blind Iran cave barb Iranocypris typhlops. Journal of Fish Biology. 81: 1747–1753.
270. Segherloo H, Farahmand H, Abdoli A, Bernatchez L, Primmer CR, Swatdipong A, Karami M, Khalili B. 2012. Phylogenetic status of brown trout Salmo trutta populations in five rivers from the southern Caspian Sea and two inland lake basins, Iran: a morphogenetic approach. Journal of Fish Biology. 81: 1479–1500.
269. Crête-Lafrenière A, Weir LK, Bernatchez L. 2012. Framing the salmonidae family phylogenetic portrait: a more complete picture from increased taxon sampling. Plos One 7: e46662
268. Boutin S, Savellec M, Pavey S, Bernatchez L, Derome N. 2012. A fast, highly sensitive double-nested PCR-based method to screen fish immunobiomes. Molecular Ecology Resources. 12: 1027-1039.
267. Vøllestad LA, Serbezov D, Bass A, Bernatchez L, Olsen EM, Taugbøl A. 2012. Small-scale movement and population structure in stream-living brown trout inferred by mark-recapture, pedigree reconstruction and population genetic study. Canadian Journal of Fisheries and Aquatic Sciences. 69: 1513-1524.
266. Evans ML, Bernatchez L. 2012. Oxidative phosphorylation gene transcription in whitefish species pairs reveals patterns of parallel and non-parallel physiological divergence. Journal of Evolutionary Biology. 25: 1823–1834.
265. Evans M, Præbel K, Peruzzi S, Bernatchez L. 2012. Parallelism in the oxygen transport system of the lake whitefish: the role of physiological adaptive divergence in ecological speciation. Molecular Ecology. 21: 4038–4050.
264. Serbezov D, Jorde PE, Bernatchez L, Olsen EM, Vøllestad LA. 2012. Life history and demographic determinants of effective/census size ratios as exemplified by brown trout (Salmo trutta). Evolutionary Applications. 5: 607-618.
263. Sauvage C, Vagner M, Derôme N, Audet C, Bernatchez L. 2012. Coding gene SNP mapping reveals QTL linked to growth and stress response in brook charr (Salvelinus fontinalis). G3: Genes, genomes, genetics. 2: 707-720.
262. Lamaze F, Sauvage C, Marie A, Garant D, Bernatchez, L. 2012. Dynamics of introgressive hybridization assessed by SNP population genomics of coding genes in stocked brook charr (Salvelinus fontinalis). Molecular Ecology. 21: 2877–2895.
261. Debes P, Normandeau E, Fraser D, Bernatchez L, Hutchings, J. 2012. Differences in transcription levels among wild, domesticated and hybrid Atlantic salmon (Salmo salar) from two environments. Molecular Ecology. 21: 2574–2587.
260. Serbezov D, Jorde PE, Bernatchez L, Olsen EM, Vøllestad LA. 2012. Short-term genetic changes: evaluating effective population size estimates in a comprehensively described brown trout (Salmo trutta) population, Genetics. 190: 579–592.
259. Marie A, Bernatchez L, Garant D. 2012. Environmental factors correlate with hybridizationin stocked brook charr (Salvelinus fontinalis). Canadian Journal of Fisheries and Aquatic Sciences. 69: 884–893.
258. Jacobsen M, Hansen MM, Orlando L, Bekkevold D, Willerslev E, Bernatchez L, Gilbert P, Thomas GM. 2012. Mitogenome sequencing reveals shallow evolutionary histories and recent divergence time between morphologically and ecologically distinct European whitefish (Coregonus spp.). Molecular Ecology. 21: 2727–2742
257. Laflamme S, Côté C, Gagnaire P-A, Castonguay M, Bernatchez L. 2012. RNA/DNA ratios in American glass eels (Anguilla rostrata): evidence for latitudinal variation in physiological status and constraints to oceanic migration? Ecology and Evolution. 2: 875–884.
256. McCairns SRJ, Bourget S, Bernatchez L. 2012. Plasticity and heritability of morphological variation within and between parapatric stickleback demes. Journal of Evolutionary Biology. 25: 1097-1112.
255. Crespel A, Bernatchez L, Garant D, Audet C. 2012. Effects of rearing environment and strain combination on heterosis in brook trout (Salvelinus fontinalis). North American Journal of Aquaculture. 74: 188–198.
254. Sauvage C, Vagner M, Derôme N, Audet C, Bernatchez L. 2012. Coding Gene Single Nucleotide Polymorphism Mapping and Quantitative Trait Loci Detection for Physiological Reproductive Traits in Brook Charr, Salvelinus fontinalis. G3: Genes, genomes, genetics. 2: 379-392.
253. Gagnaire PA, Normandeau E, Côté C, Hansen MM, Bernatchez L. 2012. The Genetic Consequences of Spatially Varying Selection in the Panmictic American Eel (Anguilla rostrata). Genetics. 190: 725-736.
252. Roy J, Yannic G, Côté S, Bernatchez L. 2012. Negative density-dependent dispersal in the American black bear (Ursus americanus) revealed by noninvasive sampling and genotyping. Ecology and Evolution. 2: 525-537
251. Boulet M, Normandeau E, Bougas B, Audet C, Bernatchez L. 2012. Comparative Transcriptomics of Anadromous and Resident Brook Charr (Salvelinus fontinalis) before their First Salt Water Transition. Current Zoology. 58: 155-167.
250. Renaut S, Maillet N, Normandeau E, Sauvage C, Derome N, Rogers SM, Bernatchez L. 2012. The genetic basis of species boundaries: the lake whitefish case study. Philosophical Transactions of the Royal Society of London. 367: 354-363
249. Evans ML, Dionne M, Miller KM, L Bernatchez. 2012. Mate choice for major histocompatibility genetic divergence as a bet-hedging strategy in the Atlantic salmon (Salmo salar). Proceedings of the Royal Society of London, B. 279: 379-386.
248. Jeukens J, Bernatchez L. 2012. Regulatory versus coding signatures of natural selection in a candidate gene involved in the adaptive divergence of whitefish species pairs (Coregonus spp.). Ecology and Evolution. 2: 258-271.
247. Boutin S, Bernatchez L, Audet C, Derôme N. 2012. Antagonistic effect of skin bacteria of brook charr (Salvelinus fontinalis) against Flavobacterium columnare and F. psychrophilum. Veterinary Microbiology. 155: 355-361.
2011
246. Apostolidis AP, Stoumboudi MTh, Kalogianni E, Cote G, Bernatchez L. 2011. Genetic divergence among native trout Salmo trutta populations from southern Balkans based on mitochondrial DNA and microsatellite variation. Journal of Fish Biology. 79: 1950–1960.
245. Bernatchez L, St-Cyr J, Normandeau E, Maes GE, Als TD, Kalujnaia S, Cramb G, Castonguay M, Hansen MM. 2011. Differential timing of gene expression regulation between leptocephali of the two Anguilla eel species in the Sargasso Sea. Ecology and Evolution. 1: 459-467.
244. Crespel A, Bernatchez L, Garant D, C Audet. 2011. Quantitative genetic analysis of the physiological stress response in three strains of brook charr Salvelinus fontinalis and their hybrids. Journal of Fish Biology. 79: 2019–2033.
243. Whiteley AR, Bhat A, Martin EP, Mayden RL, Arunachalam M, Uusi-Heikkilä S, Ahmed ATA, Shrestha J, Clark M, Stemple D, Bernatchez L. 2011. Population genomics of wild and laboratory zebrafish (Danio rerio). Molecular Ecology 20: 4259–4276.
242. García-Machado E, Hernández D, García-Debrás A, Chevalier-Monteagudo P, Metcalfe C, Bernarchez L, Casane D. 2011. Molecular phylogeny and phylogeography of the Cuban cave-fishes of the genus Lucifuga: Evidence for cryptic allopatric diversity. Molecular Phylogenetics and Evolution. 61: 470-483.
241. Pierron F, Normandeau; E, Defo MA, Campbell PGC, Bernatchez L, Couture P. Effects of chronic metal exposure on wild fish populations revealed by high-throughput cDNA sequencing. Ecotoxicology. Published online 10 May. 6: 1388-1399.
240. April J, Mayden RL, Hanner R, Bernatchez L. Genetic Calibration of Species Diversity among North America's Freshwater Fishes. Proceedings of the National Academy of Sciences USA. 108: 10603-10607.
239. Marie AD, Bernatchez L, Garant D.2011. Empirical assessment of software efficiency and accuracy to detect introgression under variable stocking scenarios in brook charr (Salvelinus fontinalis). Conservation Genetics. 12: 1215–1227
238. Pavey SA, Lamaze FC, Garant D, L Bernatchez.Full length MHC IIβ exon 2 primers for Salmonids: A new resource for Next Generation Sequencing. Conservation Genetics. Published online 6 April 2011. 3: 665-667.
237. Le RouzicA, Østbye K, Klepaker TO, Hansen TF, Bernatchez L, Schluter D, LA Vøllestad1. 2011. Strong and consistent natural selection associated with armor reduction in sticklebacks. Molecular Ecology. 20: 2483–2493
236. Granier S, Audet C, Bernatchez L. Heterosis and outbreeding depression between strains of young-of-the-year brook charr (Salvelinus fontinalis). Canadian Journal of Zoology. 89: 190–198.
235. Carroll S, Kinnison MT, L Bernatchez. 2011. Editorial: In light of evolution: interdisciplinary challenges in food, health, and the environment. Evolutionary Applications 3:155-158.
234. Als T, Hansen MM, Maes G, Castonguay M, Riemann L, Aarestrup K, Munk P, Sparholt H, Hanel R, Bernatchez L. 2011. All roads lead to home: Panmixia of European eel in the Sargasso Sea. Molecular Ecology. 20: 1333-1346
233. Jeukens J, Boyle B, Kukavica-Ibrulj I, St-Cyr J, Lévesque R, Bernatchez L. BAC library construction, screening and clone sequencing of lake whitefish (Coregonus clupeaformis, Salmonidae) towards the elucidation of adaptive species divergence. Molecular Ecology Resources. 11: 541-549.
232. Bastien A, Perry G, Savaria J-Y, Bernatchez L, C Audet. Genetic gain for growth and delayed sexual maturation using a feral strain of anadromous brook trout. North American Journal of Aquaculture. 73: 24-33.
231. Páez DJ, Bernatchez L, Dodson JJ. 2011. Alternative life histories in the Atlantic salmon: genetic covariances within the sneaker sexual tactic in males. Proceedings of the Royal Society of London, B. 278: 2150-2158.
230. Renaut S, Bernatchez L. 2011. Transcriptome-wide signature of hybrid breakdown associated with intrinsic reproductive isolation in lake whitefish species pairs (Coregonus spp. Salmonidae). Heredity. 106: 1003-1011.
229. Renaut S, Nolte AW, Rogers SM, Derome N, Bernatchez L. 2011. Gradients of ecological speciation, SNP signature of selection on standing genetic variation, and association with adaptive phenotypes in lake whitefish species pairs (Coregonus spp.). Molecular Ecology. 20:545–559.
228. McCairns SRJ, Bourget S, Bernatchez L. 2011. Putative causes and consequences of MHC variation within and between locally adapted stickleback demes. Molecular Ecology. 20:486–502.
227. Bourret V, O’Reilly PT, Carr JW, Berg PR, Bernatchez L. 2011. Temporal change in genetic integrity suggests loss of local adaptation in a wild Atlantic salmon population (Salmo salar) following introgression by farmed escapees. Heredity. 106: 500–510
226. Fraser DJ, Bernatchez L, Hansen MM, Taylor EB. 2011. The extent, scale, speed, and molecular basis of local adaptation in salmonid fishes. Heredity. 106: 404–420
225. Páez DJ, Brisson-Bonenfant C, Rossignol1 O, Guderley HE, Bernatchez L, Dodson1 JJ. 2011. Alternative developmental pathways and the propensity 1 to migrate: a case study in the Atlantic salmon. Journal of Evolutionary Biology. 24:245–255.
2010
224. Jeukens J, Renaut S, St-Cyr J, Nolte AW, L Bernatchez. 2010. The transcriptomics of sympatric dwarf and normal lake whitefish (Coregonus clupeaformis spp., Salmonidae) divergence as revealed by next-generation sequencing. Molecular Ecology. 19:5389–5403.
223. Coppe A, Pujolar JM, Maes GE, Larsen PF, Hansen MM, Bernatchez L, Zane L, Bortoluzzi S. Sequencing, de novo annotation and analysis of the first Anguilla anguilla transcriptome: EeelBase opens new perspectives for the study of the critically endangered European eel. BMC Genomics. 11:635.
222. Martínez-Fernández M, Bernatchez L, Rolán-Alvarez E, Quesada H. Insights into the role of differential gene expression on the ecological adaptation of the snail Littorina saxatilis. BMC Evolutionary Biology. 10:356.
221. Landry L, Bernatchez L. 2010. Role of epibenthic resource opportunities in the parallel evolution of lake whitefish species pairs (Coregonus sp.) Journal of Evolutionary Biology. 23: 2602-2613
220. Bernatchez L. 2010. Évolution induite par les activités anthropiques. In: Biologie Evolutive (F. Thomas, T. Lefèvre & M. Raymond eds), De BOECK. 699-748.
219. Bougas B, Audet C, Bernatchez L. 2010. The transcriptional landscape of cross-specific hybrids and its possible link with growth in brook Charr (Salvelinus fontinalis Mitchill) Genetics 186: 97–107.
218. Serbezov D, Bernatchez L, Olsen EM, Vøllestad LA. 2010. Mating patterns and determinants of individual reproductive success in brown trout (Salmo trutta) revealed by parentage analysis of an entire stream living population. Molecular Ecology. 19: 3193-3205.
217. Serbezov D, Bernatchez L, Olsen EM, Vøllestad LA. 2010. Quantitative genetic parameters for wild stream-living brown trout: heritability and parental effects. Journal of Evolutionary Biology. 23: 1631–1641.
216. Bernatchez L, Renaut S, Whiteley AR, Campbell D, Derôme N, Jeukens J, Landry L, Lu G, Nolte AW, Østbye K , Rogers SM, St-Cyr J. 2010. On the origin of species: Insights from the ecological genomics of whitefish. Philosophical Transactions of the Royal Society of London. 365: 1783-1800.
215. Croisetière S, Bernatchez L, P Belhumeur. 2010. Temperature and length-dependent modulation of the MH class IIb gene expression in brook charr (Salvelinus fontinalis) by a cis-acting minisatellite. Molecular Immunology. 9: 1817-1829.
214. Marie A, Bernatchez L, Garant D. 2010. Impacts of stocking on the genetic integrity of brook charr (Salvelinus fontinalis) populations. Molecular Ecology. 19: 2025-2037.
213. Sauvage C, Derôme N, Normandeau É, St-Cyr J, Audet C, Bernatchez L. 2010. Fast transcriptional responses to domestication in the brook charr Salvelinus fontinalis. Genetics. 185: 105–112.
212. Curry A, Bernatchez L, Audet C, Whoriskey F. 2010. The origins and persistence of anadromy in brook charr. Reviews in Fish Biology and Fisheries. 20: 557-570
211. Renaut S, Nolte AW, Bernatchez L. 2010. Mining transcriptome sequences towards identifying adaptive Single Nucleotide Polymorphisms in lake whitefish species pairs (Coregonus sp.). Molecular Ecology. 19 (Suppl. 1), 115–131.
210. McCairns RJS, Bernatchez L. 2010. Adaptive divergence between parapatric freshwater and marine stiklebacks: insights into the role of phenotypic plasticity from an integrated analysis of the ecological genetics of candidate gene expression. Evolution. 64: 1029-1047.
209. Paez DJ, Morrissey M, Bernatchez L, JJ Dodson. 2010. The genetic basis of early-life morphological traits and their relation to alternative male reproductive tactics in Atlantic salmon. Journal of Evolutionary Biology. 23: 757-768.
208. Aboim MA, Mavarez J, Bernatchez L, Coelho MM. 2010. Introgressive hybridization between two Iberian endemic cyprinid fish: a comparison between two independent hybrid zones. Journal of Evolutionary Biology. 23: 817–828.
207. martinez-Fernández M, Bernatchez L, Rolán-Alvarez E, Quesada H. 2010. Semi-quantitative differences in gene transcription profiles between sexes of a marine snail by a new variant of cDNA-AFLP analysis. Molecular Ecology Resources. 2: 324-330.
206. Lara A, Ponce de León JL, Rodríguez Rl Casane Dl Côté G, Bernatchez L, Garcia-Machado E. 2010. DNA barcoding of Cuban freshwater fishes: evidence for cryptic species and taxonomic conflicts. Molecular Ecology Resources 10: 421-430.
2009
205. Gauthier-Ouellet M, Dionne M, Caron F, King TL, Bernatchez L. 2009. Spatio-temporal dynamics of the Atlantic salmon Greenland fishery inferred from mixed-stock analysis. Canadian Journal of Fisheries and Aquatic Sciences. 66: 2040-2051.
204. Thibault I, Bernatchez L, Dodson JJ. 2009. Invasion genetics of rainbow trout (Oncorhynchus mykiss) in Eastern Quebec (Canada): dynamics of range expansion in a one-dimensional fluvial-estuarine system. Diversity and distribution. 15 : 1060–1072.
203. Aarestrup K, Økland F, Hansen MM, Righton D, Gargan P, Castonguay M, Bernatchez L, Howey P, Sparholt H , Pedersen MI, McKinley RS. 2009. Oceanic spawning migration of the European eel (Anguilla anguilla). Science. 325 : 1660.
202. Michel C, Bernatchez L, Behrmann-Godel J. 2009. Diversity and evolution of MHII β genes in a non-model percid species − the Eurasian perch (Perca fluviatilis L.). Molecular Immunology. 46: 3399-3410.
201. Côté CL, Castonguay M, Verreault G, Bernatchez L. 2009. Differential effects of origin and salinity rearing conditions on growth of glass eels of the American eel Anguilla rostrata: implications for stocking programmes. Journal of fish Biology. 74: 1934–1948.
200. Mavarez J, Audet C, Bernatchez L. 2009. Major disruption of gene expression in hybrids between young sympatric anadromous and resident populations of brook charr (Salvelinus fontinalis Mitchill). Journal of Evolutionary Biology. 22: 1708–1720.
199. Normandeau E, Hutchings JA, Fraser DJ, Bernatchez L. 2009. Population-specific gene expression responses to hybridization between farm and wild Atlantic salmon. Evolutionary Applications. 2: 1752-4571.
198. Whiteley AR, KN Persaud, N Derome, R Montgomerie, L Bernatchez. 2009. Reduced sperm performance in backcross hybrids between whitefish species-pairs (Coregonus sp.). Canadian Journal of Zoology. 87: 556-572.
197. BONIN A, BERNATCHEZ L. 2009. Challenges in assessing adaptive genetic diversity: Overview of methods and empirical illustrations. pp. 123-147 In: Bertorelle G, Bruford MW, Chemini C, Hauffe HC, Vernesi C. Population Genetics for Animal Conservation. Cambridge University Press, Cambridge, UK.
196. pierron f, v bourret v, J St-Cyr, pcg campbell, l bernatchez, pp couture. 2009. Transcriptional responses to environmental metal exposure in wild yellow perch (Perca flavescens) collected in lakes with differing environmental metal concentrations (Cd, Cu, Ni). Ecotoxicology. 18: 620-631.
195. Dionne M, Miller KM, Dodson JJ, Bernatchez L. 2009. MHC standing genetic variation and pathogen resistance in wild Atlantic salmon. Philosophical Transactions of the Royal Society of London. 364: 1555-1565.
194. Stefánsson MO, Sigurdsson T, Pampoulie C, Daníelsdóttir AK, Thorgilsson B, Ragnarsdóttir A, Gíslason D, Coughlan J, Cross TF and Bernatchez L. 2009. Pleistocene genetic legacy suggests incipient species of Sebastes mentella in the Irminger Sea. Heredity. advance 102: 514–524.
193. Gagnaire PA, Albert V, Jónsson B, L Bernatchez. 2009. Natural selection influences AFLP intraspecific genetic variability and introgression patterns in Atlantic eels. Molecular Ecology. 18: 1678-1691.
192. Nolte AW, Renaut S, L Bernatchez. 2009. Divergence in gene regulation at young life history stages of whitefish (Coregonus sp.) and the emergence of genomic isolation. BMC Evolutionary Biology. 9: 59 Online early.
191. Renaut S, Nolte AW, l Bernatchez. 2009. Gene Expression Divergence and Hybrid Misexpression between Lake Whitefish Species Pairs (Coregonus spp. Salmonidae). Molecular Biology and Evolution. 26: 925-936.
190. LECOMTE N, GAUTHIER G, GIROUX J-F, MILOT E, BERNATCHEZ L. 2009. Tug of war between continental gene flow and rearing site philopatry in a migratory bird: the sex-biased dispersal paradigm reconsidered. Molecular Ecology. Published Online: Jan 21 2009 12:42PM
189. BLANCHET S, L BERNATCHEZ, JJ DODSON. 2009. Does interspecific competition influence relationships between heterozygosity and fitness related behaviors in juvenile Atlantic salmon (Salmo salar)? Behavioral Ecology and Sociobiology 63: 605-615.
188. JEUKENS J, BITTNER D, KNUDSEN R, L BERNATCHEZ. Candidate genes and adaptive radiation: Insights from transcriptional adaptation to the limnetic niche among coregonine fishes (Coregonus sp., Salmonidae). Molecular Biology and Evolution. 26: 155-166.
2008
187. SCHLEI OR, A CRÊTE-LAFRENIÈRE, AR WHITELEY, RJ BROWN, JB OLSEN, L BERNATCHEZ, JK WENBURG. 2008. DNA barcoding of eight North American coregonine species. Molecular Ecology Resources. 8: 1212-1218.
186. BRODEUR NN, MV NOËL, O VENTER, L BERNATCHEZ, S DAYANANDAN, JWA GRANT. 2008. No evidence of kin bias in dispersion of young-of-the-year Atlantic salmon (Salmo salar L.) in a natural stream. Journal of Fish Biology. 73: 2361-2370.
185. FRASER DJ, L BERNATCHEZ. 2006. Ecology, evolution and conservation of lake-migratory brook trout: a perspective from pristine populations. Transactions of the American Fisheries Society. 137:1191-1202
184. DIONNE M, CARON F, DODSON JJ, L BERNATCHEZ. Comparative survey of within-river genetic structure in Atlantic salmon; relevance for management and conservation. Conservation Genetics 9: 10.1007/s10592-008-9647-5 (online early)
183. BLANCHET S, L BERNATCHEZ, JJ DODSON. The interaction of interspecific competition and environmental variablility on the diet activity of Atlantic salmon, Salmo salar. Canadian Journal of Fisheries and Aquatic Sciences. 65: 1545-1553.
182. McCAIRNS RJS, L BERNATCHEZ. Landscape genetic analyses reveal cryptic population structure and putative selection gradients in a large-scale estuarine environment. Molecular Ecology. 17: 3901-3916.
181. Whiteley AR, N Derôme, SM Rogers, J St-Cyr, A Labbe, L Bernatchez. The phenomics of brain transcriptomes regulating adaptive divergence in lake whitefish species pairs. Genetics 180: 147-164.
180. BLANCHET S, D PÁEZ, L BERNATCHEZ, JJ DODSON. An integrated comparison of captive-bred and wild Atlantic salmon (Salmo salar): implications for supportive breeding programs. Biological Conservation 141: 1989-1999.
179. Derome N, B Bougas, SM Rogers, A Whiteley, A Labbe, J Laroche, L. Bernatchez. 2008. Pervasive sex-linked effects on transcription regulation as revealed by eQTLmapping in lake whitefish species pairs (Coregonus sp, Salmonidae). Genetics 179: 1903-1917.
178. HUBERT N, R HANNER, E HOLM, NE MANDRAK, N LAVIOLETTE, E TAYLOR, M BURRIDGE, D WATKINSON, A CURRY, P BENTZEN, J ZHANG2, J APRIL, L BERNATCHEZ1. Identifying Canadian freshwater fishes through DNA barcodes. PLOS One*. 3: e2490
177. ROBERGE C, S BLANCHET, JJ DODSON, H GUDERLEY, L BERNATCHEZ. Disturbance of social hierarchy by an invasive species: a gene transcription study. PLOS One. 3: e2408
176. BERNATCHEZ L, M TSENG. 2008. Editorial. Evolutionary Applications. 1: 1-2.
175. DIONNE M, F CARON, JJ DODSON, L BERNATCHEZ. 2008. Landscape genetics and hierarchical genetic structure in Atlantic salmon: the interaction of gene flow and local adaptation. Molecular Ecology. 17: 2382-2396.
174. THÉRIAULT V, ES DUNLOP, U DIECKMANN, L BERNATCHEZ, JJ. DODSON. 2008. The impact of fishing-induced mortality on the evolution of alternative life-history tactics in brook charr. Evolutionary Applications. 1: 409-423.
173. PÁEZ D, L BERNATCHEZ, JJ DODSON. 2008. The morphological plastic response to water current velocity varies with age and sexual state in juvenile Atlantic salmon, Salmo salar. Freshwater Biology. 53 : 1544-1554.
172. CROISETIÈRE S, PD TARTE, L BERNATCHEZ, P BELHUMEUR. Identification of MHC ClassIIB resistance/susceptibility alleles to Aeromonas salmonicida in brook charr (Salvelinus fontinalis). Molecular Immunology. 45 : 3107-3116.
171. ST-CYR J, N DEROME, L BERNATCHEZ. 2008. The transcriptomics of life-history trade-offs in whitefish species pairs (Coregonus sp.). Molecular Ecology. 17: 1850-1870.
170. LECLERC E, Y MAILHOT, M MINGELBIER, L BERNATCHEZ. 2008. The landscape genetics of yellow perch (Perca flavescens) in a large fluvial ecosystem. Molecular Ecology. 17: 1702-1717.
169. MILOT M, H WEIMERSKIRCH, L BERNATCHEZ. 2008. The seabird paradox: dispersal, genetic drift and population dynamics in a highly mobile but philopatric albatross species. Molecular Ecology. 17: 1658–1673.
168. BOURRET V, PP COUTURE, PCG CAMPBELL, L BERNATCHEZ. 2008. Evolutionary toxicology of wild yellow perch (Perca flavescens) populations chronically exposed to a polymetallic gradient. Aquatic Toxicology. 86: 76-90.
167. SMITH TB, L BERNATCHEZ (eds). 2008. Evolutionary Change in Human-altered Environments. Molecular Ecology. 17: 1-500.	HTTP
166. SMITH TB, L BERNATCHEZ. 2008. Preface to the Special Issue. Evolutionary Change in Human-altered Environments. Molecular Ecology. 17: 1-8.
165. ROBERGE C, E NORMANDEAU, S EINUM, H GUDERLEY, L BERNATCHEZ. 2008. Genetic consequences of interbreeding between farmed and wild Atlantic salmon: insights from the transcriptome. Molecular Ecology. 17: 314-324
2007
164. CÔTÉ G, GML PERRY, PU BLIER, L BERNATCHEZ. 2007. The influence of gene-environment interactions on GHR and IGF-1 expression and their association with growth in brook charr, Salvelinus fontinalis. BMC Genetics. 8:87.
163. BLANCHET S, L BERNATCHEZ, JJ DODSON. 2007. Behavioural and growth responses of a territorial fish (Atlantic salmon, Salmo salar L.) to multiple smulated predators. Ethology. 113: 1061–1072
162. ROBERGE C, H GUDERLEY, L BERNATCHEZ. Genome-wide Identification of Genes under Selection: Gene Transcription Qst Scan in Diverging Atlantic Salmon Subpopulations. Genetics. 177: 1011–1022
161. BOULET M, S COUTURIER, SD CÔTÉ, R. OTTO, L BERNATCHEZ. 2007. Integrative use of spatial, genetic, and demographic analyses for investigating genetic connectivity between migratory, montane, and sedentary caribou herds. Molecular Ecology. 16: 4223-4240.
160. THÉRIAULT V, D GARANT, L BERNATCHEZ, JJ DODSON. 2007. Heritability of life-history tactics and genetic correlation with body size in a natural population of brook charr (Salvelinus fontinals). Journal of Evolutionary Biology. 20:2266-2277
159. BLAIS J, C RICO, C VAN OOSTERHOUT, J CABLE, GF TURNER, L BERNATCHEZ. 2007. MHC Adaptive Divergence Between Closely Related and Sympatric African Cichlids. PLOS One. 8: e734, 1-12
158. FRASER DJ, MM HANSEN, S OSTERGAARD, N TESSIER, M LEGAULT, L BERNATCHEZ. 2007. Comparative estimation of effective population sizes and temporal gene flow in two contrasting population systems. Molecular Ecology. 16: 3866-3889
157. DIONNE M, KM MILLER, JJ DODSON, F CARON, L BERNATCHEZ. 2007. Clinal variation in MHC diversity with temperature: Evidence for the role of host-pathogen interaction on local adaptation in Atlantic salmon. Evolution. 61: 2154-2164.
156. THÉRIAULT V, L BERNATCHEZ, JJ DODSON. 2007. Mating system and individual reproductive success of sympatric anadromous and resident brook charr, Salvelinus fontinalis, under natural conditions. Behavioral Ecology and Sociobiology. 62: 51-65
155. DUCHESNE P, L BERNATCHEZ. 2007. Individual-based genotype methods in aquaculture. P. 87-108 in Aquaculture Genome Technologies. John Liu, editor. Blackwell Publishing
154. BLANCHET S, G LOOT, L BERNATCHEZ, JJ DODSON. 2007. The disruption of dominance hierarchies by a non-native species: an individual-based analysis. Oecologia. 152: 569-581.
153. ROGERS SM, L BERNATCHEZ. 2007. The Genetic architecture of ecological speciation and the association with signatures of selection in natural lake whitefish (Coregonus sp. Salmonidae) species pairs. Molecular Biology and Evolution. 24: 1423-1438.
152. LANDRY L, WF VINCENT, L BERNATCHEZ. 2007. Parallelism between limnological features and phenotypic evolution of lake whitefish dwarf ecotypes. Journal of Evolutionary Biology. 20: 971-984.
151. DUPONT P-P, V BOURRET, L BERNATCHEZ. 2007. Interplay between ecological, behavioural and historical factors in shaping the genetic structure of sympatric walleye populations (Sander vitreus). Molecular Ecology. 16, 937–951.
150. MILOT M, H WEIMERSKIRCH†, P DUCHESNE, L BERNATCHEZ. 2007. Surviving with low genetic diversity: the case of albatrosses. Proceedings of the Royal Society of London, B. 274: 779-787.
149. ROGERS SM, N ISABEL, L BERNATCHEZ. 2007. Linkage maps of the dwarf and normal lake whitefish (Coregonus Clupeaformis) species complex and their hybrids reveal the genetic architecture of population divergence. Genetics. 175: 1-24.
148. ROBERGE C, PÁEZ DJ, ROSSIGNOL O, GUDERLEY H, DODSON JJ, L BERNATCHEZ. 2007. Genome-wide survey of the gene expression response to saprolegniasis in atlantic salmon. Molecular Immunology. 44: 1374- 1383.
147. MAINGUY J, L BERNATCHEZ. 2007. L'analyse de l'ADN sans manipulaiton des animaux: un outil incontournable pour la gestion et la conservation des espèces rares ou elusives. Le naturaliste canadien. 131: 51-58.
2006
146. DEROME, N, L BERNATCHEZ. 2006. The transcriptomics of ecological convergence between two limnetic coregonine fishes (Salmonidae). Molecular Biology and Evolution. 23: 2370-2378.
145. ØSTBYE, K., P-A. AMUNDSEN, L. BERNATCHEZ, A. KLEMETSEN, R. KNUDSEN, R. KRISTOFFERSEN, T. F. NÆSJE1 K. HINDAR. 2006. Parallel evolution of eco-morphological traits in european whitefish Coregonus Lavaretus (L.) during postglacial times. Molecular Ecology. 15: 3983-4001.
144. VELIZ, D., P. DUCHESNE, E. BOURGET, L. BERNATCHEZ. 2006. Genetic evidence for kin aggregation in the intertidal acorn barnacle (Semibalanus Balanoides). Molecular Ecology. 15: 4193-4202.
143. ROGERS, S.M., L. BERNATCHEZ. 2006. The genetic basis of intrinsic and extrinsic postzygotic reproductive isolation jointly promoting speciation in the lake whitefish sepcies complex (Coregonus Clupeaformis). Journal of Evolutionary Biology. 19: 1979-1994.
142. FRASER, D.J., T. COON , M.R. PRINCE, R. DION, L. BERNATCHEZ. 2006. Integrating traditional and evolutionary knowledge in biodiversity conservation: a population level case study. Ecology and Society. 11(2): 4.	HTTP
141. DUCHESNE, P., C. ÉTIENNE, L. BERNATCHEZ. 2006. PERM: A computer program to detect structuring factors in meaningful social units. Molecular Ecology Notes. 6: 965-976.
140. LIEUTENANT-GOSSELIN, M., L. BERNATCHEZ. 2006. Local heterozygosity-fitness correlations with global positive effects on fitness in threespine stickleback. Evolution. 60: 1658-1668.
139. LIPPÉ, C., P. DUMONT, L. BERNATCHEZ. 2006. High genetic diversity and no inbreeding in the endangered Copper redhorse, Moxostoma hubbsi (Catostomidae, Pisces): the positive sides of a long generation time. Molecular Ecology. 15: 1769-1780.
138. DEROME, N., P. DUCHESNE, L. BERNATCHEZ. 2006. Parallelism in gene transcription among sympatric lake whitefish ecotypes (Coregonus clupeaformis Mitchill). Molecular Ecology. 15: 1239-1250.
137. ALBERT, V., B. JÓNSSON, L. BERNATCHEZ. 2006. Natural hybrids in Atlantic eels (Anguilla anguilla, A. rostrata): evidence for successful reproduction and fluctuating abundance in space and time. Molecular Ecology. 15: 1903-1916.
136. LECOMTE, N., G. GAUTHIER, J. F. GIROUX, L. BERNATCHEZ. 2006. A new non-damaging blood sampling technique for waterfowl embryos. Journal of Field Ornithology. 77: 67-70.
135. BOULET, M. C. POTVIN, F. SHAFFER, L. BERNATCHEZ. 2006. Conservation genetics of the threatened horned grebe (Podiceps auritus L.) population of the Magdalen Islands, Québec. Conservation Genetics. 6:539-550.
134. SCHULZ, M., J. FREYHOF, R. SAINT-LAURENT, K. ØSTBYE, T. MEHNER, L. BERNATCHEZ. 2006. Independent evolution of two spring-spawning ciscoes of the Coregonus albula (L.). species group, (Salmoniformes: Coregonidae) in Germany. Journal of Fish Biology. 68: 1-17
133. VÉLIZ, D., E. BOURGET, L. BERNATCHEZ. 2006. Field evidence for an association between growth and protein polymorphism in the acorn barnacle Semibalanus balanoides. Marine Ecology Progress Series. 308: 197-206.
132. ROBERGE, C., S. EINUM, H. GUDERLEY, L. BERNATCHEZ. 2006. Rapid evolutionary changes of gene transcription profiles in farmed Atlantic salmon. Molecular Ecology. 15: 9-20.
131. VÉLIZ, D., P. DUCHESNE, E. BOURGET, L. BERNATCHEZ. 2006. Stable genetic polymorphism in heterogeneous environments: balance between asymmetrical dispersal and selection in the acorn barnacle. Journal of Evolutionary Biology. 19: 589-599.
2005
130. ØSTBYE, K., L. BERNATCHEZ, T.F.NÆSJE , M. HIMBERG, K. HINDAR. 2005. Evolutionary history of European whitefish (Coregonus lavaretus L.) as inferred from mtDNA phylogeography and gill-raker numbers. Molecular Ecology. 14: 4371-4388.
129. FRASER, D., L BERNATCHEZ. 2005. Migratory brook charr exhibit population- and kin-associations beyond juvenile stages. Molecular Ecology. 14: 3133-3146.
128. PERRY, G.M.L., C. AUDET, L. BERNATCHEZ. 2005. Maternal genetic effects on adaptive divergence between anadromous and resident brook charr during early life history. Journal of Evolutionary Biology. 18: 1348-1361.
127. DUCHESNE, P., CASTRIC, T. L. BERNATCHEZ. 2005. PASOS (parental allocation of singles in open systems):A computer program for individual parental allocation with missing parents. Molecular Ecology Notes. 5: 701-704.
126. PERRY, G.M.L, T.L. KING, J. SAINT-CYR, M. VALCOURT, L. BERNATCHEZ. 2005. Isolation and cross-familial amplification of forty-one microsatellites for the brook charr (Salvelinus fontinalis). Molecular Ecology Notes. 5: 346-351.
125. FRASER, D., L BERNATCHEZ. 2005. Adaptive migratory divergence among sympatric brook charr populations. Evolution. 59: 611-624.
124. GOSSELIN, T., B. SAINTE-MARIE, AND L. BERNATCHEZ. 2005. A genetic assessment of multiple paternity in wild American lobster, Homarus americanus. Molecular Ecology. 14: 1517-1526.
123. FRASER, D., L BERNATCHEZ. 2005. Allopatric origins of sympatric brook charr populations: colonization history and admixture. Molecular Ecology. 14: 1497-1510.
122. BERNATCHEZ, L. 2005. On the role of natural selection in promoting population divergence in whitefish (Coregonus sp. ): relevance for population management in the Great Lakes. In Proceedings of a workshop on the dynamics of lake whitefish (Coregonus clupeaformis) and the amphipod Diporeia in the Great Lakes. Great Lakes Fisheries Commission Technical Report. 66: 21-46.
121. ØSTBYE, K., T.F.NÆSJE, L. BERNATCHEZ, O.T. SANDLUND. K. HINDAR. 2005. Morphological divergence and origin of sympatric populations of European whitefish (Coregonus lavaretus L.) in Lake Femund, Norway. Journal of Evolutionary Biology. 18: 683-702.
120. GARANT, D. J.J. DODSON, L. BERNATCHEZ. 2005. Offspring genetic diversity increases fitness of female Atlantic salmon (Salmo salar). Behavioral Ecology and Sociobiology. 57: 240-244.
119. ROGERS, S.M., L. BERNATCHEZ. 2005. Integrating QTL mapping and genomic scans towards the characterization of candidate loci under parallel directional selection in the lake whitefish (Coregonus clupeaformis). Molecular Ecology. 14: 351-361.
2004
118. BLAIS, J., RICO, C., L. BERNATCHEZ. 2004. Non-linear effects of female mate choice in wild three spine sticklebacks. Evolution 58: 2498-2510.
117. LIPPÉ, C., DUMONT, P. L. BERNATCHEZ. 2004. Isolation and identification of 21 microsatellite loci in the Copper redhorse (Moxostoma hubbsi; Catostomidae) and their variability in other catostomids.Molecular Ecology Notes. 4: 638-641.
116. PERRY, G.M.L., L. BERNATCHEZ, B. LAPLATTE AND C. AUDET. 2004. Shifting patterns in genetic control at the embryo-alevin boundary in brook charr. Evolution. 58: 2002-2012.
115. PERRY, G.M.L., P. TARTE, S. CROISETIÈRE, P. BELHUMEUR AND L. BERNATCHEZ. 2004. Genetic variance and covariance for 0+ brook charr (Salvelinus fontinalis) weight and survival time of furunculosis (Aeromonas salmonicida) exposure. Aquaculture. 235: 263-271.
114. VÉLIZ, D., E. BOURGET, L. BERNATCHEZ. 2004. Regional variation in the spatial scale of selection at MPI* and GPI* in the acorn barnacle Semibalanus balanoides (Crustacea). Journal of Evolutionary Biology.17: 953-966.
113. CASTRIC, V. L. BERNATCHEZ. 2004. Individual assignment test reveals differential restriction to dispersal between two salmonids despite no increase of genetic differences with distance. Molecular Ecology. 13: 1299-1312.
112. CAMPBELL, D, L. BERNATCHEZ. 2004. Genomic scan using AFLP markers as a means to assess the role of directional selection in the divergence of sympatric whitefish ecotypes. Molecular Biology and Evolution. 21: 945-956.
111. CURRY, R.A., S. L. CURRIE, L. BERNATCHEZ, R. SAINT-LAURENT, K. GOSSE. 2004. The rainbow smelt (Osmerus mordax) complex of Lake Utopia: threatened or misunderstood? Environmental Biology of Fishes. 69: 153-166.
110. ROGERS M.R., M-H MARCHAND, L. BERNATCHEZ. 2004. Isolation, characterization, and cross-salmonid amplification of 31 microsatellite loci in the lake whitefish (Coregonus clupeaformis, Mitchill). Molecular Ecology Notes. 4: 89-92.
109. FRASER, D., C. LIPPÉ, L BERNATCHEZ. 2004. An integrative examination of asymmetric migration, sex-biased dispersal and resulting population structure in lacustrine brook charr (Salvelinus fontinalis Mitchill). Molecular Ecology. 13 : 67-80.
108. BERNATCHEZ, L. 2004. Ecological theory of adaptive radiation: an empirical assessment from coregonine fishes (Salmoniformes). Pages 175-207 in A.P. Hendry and S.C. Stearns, eds. Evolution illuminated: salmon and their relatives. Oxford Univ. Press, Oxford.
2003
107. GOSSELIN, T., B. SAINTE-MARIE, L. BERNATCHEZ. 2003. Patterns of sexual cohabitation and female ejaculate storage in the American lobster (Homarus americanus). Behavioral Ecology and Sociobiology. 55 : 151-160.
106. COURTOIS, R., L. BERNATCHEZ, OUELLET J.-P., BRETON L. 2003. Significance of caribou ecotypes (Rangifer tarandus) from a molecular genetic viewpoint. Conservation Genetics. 4: 393-404.
105. CAMPBELL, D, P. DUCHESNE, L. BERNATCHEZ. 2003. AFLP utility for population assignment studies: analytical investigation and empirical comparison with microsatellites. Molecular Ecology. 12 : 1979-1992.
104. GARANT, D. J.J. DODSON, L. BERNATCHEZ. 2003. Differential reproductive success and heritability of alternative reproductive tactics in wild Atlantic salmon (Salmo salar L.). Evolution. 57 : 1133-1141.
103. GARANT, D., I. A. FLEMING, S. EINUM, L. BERNATCHEZ. 2003. Alternative male life-history tactics as potential vehicles for speeding introgression of farm salmon traits into wild populations. Ecology Letters. 6: 541-549.
102. BERNATCHEZ, L., C. LANDRY. 2003. MHC studies in non-model vertebrates: what have we learned about natural selection in 15 years? Journal of Evolutionary Biology. 16: 363-377.
101. CASTRIC, V. L. BERNATCHEZ. 2003. The rise and fall of isolation by distance in the anadromous brook charr (Salvelinus fontinalis Mitchill). Genetics. 163 : 983-996.
100. WIRTH, T., L. BERNATCHEZ. 2003. Decline of North Atlantic eels : a fatal strategy? Proceedings of the Royal Society of London, B. 270 : 681-688
99. STRECKER, U., L., BERNATCHEZ, H. WILKENS. 2003. Genetic divergence between cave and surface populations of Astyanax in Mexico (Characidae, Teleostei). Molecular Ecology. 12: 699-710.
98. SAINT-LAURENT R., M. LEGAULT, L. BERNATCHEZ. 2003. Divergent selection maintains adaptive differentiation despite high gene flow between sympatric rainbow smelt ecotypes (Osmerus mordax Mitchill). Molecular Ecology. 12: 315-330.
2002
97 . TURGEON, J., L. BERNATCHEZ. 2002. Reticulate evolution and phenotypic diversity in North American ciscoes, Coregonus ssp.(Teleostei:Salmonidae) : implications for the conservation of an evolutionary legacy. Conservation Genetics. 4 : 67-81.
96. ROGERS M.R., V. GAGNON, L. BERNATCHEZ. 2002. Genetically based phenotype-environment association for swimming behavior in Lake Whitefish ecotypes (Coregonus clupeaformis Mitchill). Evolution. 56 : 2322-2329.
95. PRESA, P., B.G. PARDO, P. MARTINEZ, L. BERNATCHEZ. 2002. Phylogeographic Congruence Between mtDNA and rDNA ITS Markers in Brown Trout. Molecular Biology and Evolution. 19 : 2161-2175.
94. DOIRON, S., L. BERNATCHEZ, P. BLIER. 2002. A comparative mitogenomic analysis of the potential adaptive value of arctic charr mtDNA introgression in brook charr populations. Molecular Biology and Evolution. 19 : 1902-1909.
93. BERNATCHEZ, L., J. G. RHYDDERCH, F. W. KIRCHEIS. 2002. Microsatellite gene diversity analysis in landlocked Arctic charr, Salvelinus alpinus, from Maine, USA. Transactions of the American Fisheries Society. 131 : 1106-1118.
92. DUCHESNE, P., L. BERNATCHEZ. 2002. AFLPOP : A computer program for simulated and real population allocation based on AFLP data. Molecular Ecology Notes. 3 : 380-383.
91. MORITZ, C., K. McGUIGAN, L. BERNATCHEZ. 2002. Conservation of freshwater fishes: integrating evolution and genetics with ecology. Pp. 293-310, in Freshwater fish conservation: Options for the future. Eds. M.J. Collares-Pereira, M. Coelho & I.B. Cowx, Blackwells, Oxford
90. BOULA, D., V. CASTRIC, C. AUDET, L. BERNATCHEZ. 2002. Physiological, endocrine and genetic bases of anadromy in the brook charr, Salvelinus fontinalis, of the Laval River (Québec, Canada). Environmental Biology of Fishes.
89. CASTRIC, V., L. BERNATCHEZ, K. BELKHIR, F. BONHOMME. 2002. Heterozygote deficiencies in small lacustrine populations of brook charr Salvelinus fontinalis Mitchill (Pisces, Salmonidae) ; a test of alternative hypotheses. Heredity. 89:27-35
88. DUCHESNE, P., M.-H. GODBOUT, L. BERNATCHEZ. 2002. PAPA (Package for the Analysis of Parental Allocation) : A computer program for simulated and real parental allocation. Molecular Ecology Notes. 2 : 191-194.
87. GARANT, D., P.-M. FONTAINE, S.P. GOOD, J.J. DODSON, L.BERNATCHEZ. 2002. Influence of male parental identity on growth and survival of offspring in Atlantic Salmon (Salmo salar). Evolutionary Ecology Research. 4 : 537-549.
86. DUCHESNE, P., L. BERNATCHEZ. 2002. Investigating the dynamics of inbreeding in multi-generation supportive breeding using a recurrence equations system generator. Conservation Genetics. 3: 47-60.
85. ROQUES, S., J.-M. SÉVIGNY, L. BERNATCHEZ. 2002. Genetic structure of deep-water redfish, Sebastes mentella, populations across the North Atlantic. Marine Biology. 140 : 297-307.
84. DUFRESNE, F., E. BOURGET, L. BERNATCHEZ. 2002. Differential patterns of spatial divergence in microsatellite and allozyme alleles : further evidence for locus-specific selection in the acorn barnacle, Semibalanus balanoides ? Molecular Ecology. 11 : 113-123.
2001
83. ROGERS, S.M., D. CAMPBELL, S. BAIRD, R.G. DANZMANN, L. BERNATCHEZ. 2001. Combining the analyses of introgressive hybridization and linkage mapping to investigate the genetic architecture of population divergence in the lake whitefish (Coregonus clupeaformis, Mitchill). Genetica. 111 : 25-41.
82. FRASER, D.J., L. BERNATCHEZ. 2001. Adaptive evolutionary conservation : towards a unified concept for defining conservation units. Molecular Ecology. 10 : 2741-2752.
81. TURGEON, J., L. BERNATCHEZ. 2001. Clinal variation at microsatellite loci reveals historical secondary intergradation between glacial races of Coregonus artedi (Teleostei : Coregoninae). Evolution. 11: 2274-2286.
80. LANDRY, C., L. BERNATCHEZ 2001. Comparative analysis of population structure across environments and geographic scales at Major Histocompatibility Complex and microsatellite in a philopatric fish (Salmo salar). Molecular Ecology. 10: 2525-2540.
79. POTVIN, C., L. BERNATCHEZ. 2001. Lacustrine spatial distribution of landlocked Atlantic salmon populations assessed across generations by multi-locus individual assignment and mixed-stock analyses. Molecular Ecology. 10 : 2375-2388.
78. LANDRY, C., D. GARANT, P. DUCHESNE, L. BERNATCHEZ. 2001. "Good genes as heterozygosity": MHC and mate choice in Atlantic salmon (Salmo salar). Proceedings of the Royal Society of London, Series B. 1473 : 1279-1285.
77. GARANT, D. J.J. DODSON, L. BERNATCHEZ. 2001. A genetic evaluation of mating system and determinants of individual reproductive success in Atlantic salmon (Salmo salar L.). Journal of Heredity. 92 : 137-145.
76. CASTRIC, V., F. B. BONNEY, L. BERNATCHEZ. 2001. Landscape structure and hierarchical genetic diversity in Salvelinus fontinalis. Evolution. 55 : 1016-1028.
75. BRUNNER, P.C., M.R. DOUGLAS, A. Osinov, C. C. WILSON, L. BERNATCHEZ. 2001. Holarctic phylogeography of Arctic charr (Salvelinus alpinus) inferred from mitochondrial DNA sequences. Evolution. 55 : 573-586.
74. LU, G. D.J. BASLEY, L. BERNATCHEZ. 2001. Contrasting patterns of mitochondrial DNA and microsatellite introgressive hybridization between lineages of lake whitefish (Coregonus clupeaformis) : relevance for speciation. Molecular Ecology. 10 : 965-985.
73. TURGEON, J., L. BERNATCHEZ. 2001. MtDNA phylogeography of lake cisco (Coregonus artedi): evidence supporting extensive secondary contacts between two glacial races. Molecular Ecology. 10 : 987-1001.
72. BERNATCHEZ, L. 2001. The evolutionary history of brown trout Salmo trutta L. inferred from combined phylogeographic, nested clade and mismatch analyses of mitochondrial DNA variation. Evolution. 55 : 351-379.
71. WIRTH, T., L. BERNATCHEZ. 2001. Genetic evidence against panmixia in the European eel. Nature. 409 : 1037-1040 .
70. ROQUES, S., J.-M. SÉVIGNY, L. BERNATCHEZ. 2001. Evidence for broadscale introgressive hybridization between two redfish (genus Sebastes) in the North-west Atlantic : a rare marine example. Molecular Ecology. 10 : 149-166.
2000
69. LECLERC, D,. T. WIRTH, L. BERNATCHEZ. 2000. Isolation and characterization of microsatellite loci in the YELLOW PERCH (Perca flavescens), and cross-species amplification within the family Percidae. Molecular Ecology. 9 : 821-823.
68. HÉBERT, C., R.G. DANZMAN, M.W. JONES, L. BERNATCHEZ. 2000. Hydrography and population genetic structure in brook charr (Salvelinus fontinalis, Mitchill) from eastern Canada. Molecular Ecology. 9 : 971-982.
67. GARANT, D., J.D. DODSON, L. BERNATCHEZ. 2000. Ecological determinants and temporal stability of within-river population structure in Atlantic salmon (Salmo salar L.): population subdivision and spatial:noise effects. Molecular Ecology. 9 : 615-628.
66. TESSIER, N., L. BERNATCHEZ. 2000. A genetic assessment of single versus double origin of landlocked Atlantic salmon (Salmo salar) from Lake Saint-Jean, Québec, Canada. Canadian Journal of Fisheries and Aquatic Sciences. 57: 797-804
65. BERNATCHEZ, L., P. DUCHESNE. 2000. Individual-based genotype analysis in studies of parentage and population assignment : how many loci, how many alleles ? Canadian Journal of Fisheries and Aquatic Sciences. 57:1-12.
1999
64. LU, G., L. BERNATCHEZ. 1999. A study of fluctuating asymetry in hybrids of dwarf and normal lake whitefish (Coregonus clupeaformis) from different glacial races. Heredity. 83 : 742-747.
63. WIRTH, T., R. SAINT-LAURENT, L. BERNATCHEZ. 1999. Isolation and characterization of microsatellite loci in the walleye (Stizostedion vitreum), and cross-species amplification within the family Percidae. Molecular Ecology. 8: 1961-1963.
62. DUFRESNE, F., M. PARENT, L. BERNATCHEZ. 1999. Isolation and characterization of microsatellite loci markers in the acorn barnacle Semibalanus balanoides. Molecular Ecology. 8: 1558-1559.
61. TURGEON, J., A. ESTOUP, L. BERNATCHEZ. 1999. Species flock in the North American Great Lakes: molecular ecology of the lake Nipigon ciscoes (Teleostei: Coregonidae: Coregonus). Evolution. 53: 1857-1871.
60. LU., G., L. BERNATCHEZ. 1999. Correlated trophic specialization and genetic divergence in sympatric lake whitefish ecotypes (Coregonus clupeaformis): support for the ecological speciation hypothesis. Evolution. 53: 1491-1505.
59. ROQUES, S., P. DUCHESNE, L.BERNATCHEZ. 1999. Potential of microsatellites for individual assignment: the North Atlantic redfish (genus Sebastes) species complex as a case study. Molecular Ecology. 8: 1703-1717.
58. BERNATCHEZ, L., A. CHOUINARD, G. LU. 1999. Integrating molecular genetics and ecology in studies of adaptive radiation: whitefish, Coregonus, as a case study. Biological Journal of the Linnean Society. 68 : 173-194.
57. BERNATCHEZ, L., C.C. WILSON. 1999. Diadromy and genetic diversity in Neartic and Palearctic fishes : a reply. Molecular Ecology. 8 : 527-528.
56. DYNES, J., P. MAGNAN, L. BERNATCHEZ, M.A. RODRIGUEZ. 1999. Genetic and morphological variations between two forms of lacustrine brook charr. Journal of Fish Biology. 54 : 955-972.
55. ROQUES, S., D. PALLOTTA, J.-M. SÉVIGNY, L. BERNATCHEZ. 1999. Isolation and characterization of polymorphic microsatellite markers in the North Atlantic redfish (Teleostei : Scorpaenidae, genus Sebastes). Molecular Ecology. 8: 685-686.
54. ANGERS, B., P. MAGNAN, M. PLANTE, L. BERNATCHEZ. 1999. Canonical correspondence analysis for estimating spatial and environmental effects on microsatellite gene diversity in brook charr (Salvelinus fontinalis). Molecular Ecology. 8:1043-1054.
53. DOUGLAS, M.R., P.C. BRUNNER, L. BERNATCHEZ. 1999. Do assemblages of Coregonus (Teleostei: Salmoniformes) in the Central Alpine region of Europe represent species flocks? Molecular Ecology. 8: 589-604.
52. TESSIER, T., L. BERNATCHEZ. 1999. Stability of population structure and genetic diversity across generations assessed by microsatellites among sympatric populations of landlocked Atlantic salmon (Salmo salar L.). Molecular Ecology. 8: 169-179.
1998
51. LI, S, G. LU, L. BERNATCHEZ. 1998. Diversity of mitochondrial DNA in the populations of silver carp, bighead carp, grass carp and black carp in the middle- and lower reaches of the Yangtze River. Acta Zoologica Sinica. 44: 82-93.
50. CHOUINARD, A., L. BERNATCHEZ. 1998. A study of trophic niche partitioning between larval populations of reproductively isolated whitefish (Coregonus sp.) ecotypes. Journal of Fish Biology. 53 : 1231-1242.
49. GLÉMET, H. BLIER, P., L. BERNATCHEZ. 1998. Geographical extent of Arctic char (Salvelinus alpinus) mtDNA introgression in brook char populations (S. fontinalis) from eastern Québec, Canada. Molecular Ecology. 7 : 1655-1662.
48. DANZMANN, R.G., MORGAN R. P. Jr., JONES, M. W. JONES, L. BERNATCHEZ, P. E. IHSSEN. 1998. A major sextet of mitochondrial DNA phylogenetic assemblages extant in eastern North American brook charr (Salvelinus fontinalis) : distribution and postglacial dispersal patterns. Canadian Journal of Zoology. 76 : 1300-1318.
47. BERNATCHEZ, L., J.B. DEMPSON, S. MARTIN. 1998. Microsatellite DNA assessment of genetic structure in andromous Arctic char, Salvelinus alpinus, from Labrador, Canada. Canadian Journal of Fisheries and Aquatic Sciences. 55: 1264-1272.
46. BERNATCHEZ, L., C.C. WILSON. 1998. Comparative phylogeography of nearctic and palearctic freshwater fishes. Molecular Ecology. 7: 431-452.
45. PIGEON, D., J.J. DODSON, L. BERNATCHEZ. 1998. A mtDNA analysis of spatiotemporal distribution of two genetically distinct sympatric larval populations of rainbow smelt (Osmerus mordax) in the middle estuary of the St. Lawrence river, Québec, Canada. Canadian Journal of Fisheries and Aquatic Sciences. 55: 1739-1747.
44. DOYON, J.-F., L. BERNATCHEZ, M. GENDRON, R. VERDON, R. FORTIN. 1998. Comparison of normal and dwarf populations of lake whitefish (Coregonus clupeaformis) with reference to hydroelectric reservoirs in Northern Quebec. Archiv für Hydrobiologie. Special Issues Limnology. 50: 97-108.
43. LU, G., L. BERNATCHEZ. 1998. Experimental evidence for reduced hybrid viability between dwarf and normal ecotypes of lake whitefish (Coregonus clupeaformis Mitchill). Proceedings of the Royal Society of London, Series B 265: 1025-1030.
42. BRUNNER, P.C., M.R. DOUGLAS, L. BERNATCHEZ. 1998. Microsatellite and mitochondrial DNA assessment of population structure and stocking effects in Arctic charr Salvelinus alpinus (Teleostei: Salmonidae) from central alpine lakes. Molecular Ecology. 7: 209-223.
41. ANGERS, B., L. BERNATCHEZ. 1998. Combined use of SMM and non-SMM methods to infer fine structure and evolutionary history of closely related brook charr (Salvelinus fontinalis, Salmonidae) populations from microsatellites. Molecular Biology and Evolution. 15: 143-159.
40. WILSON, C.C., L. BERNATCHEZ. 1998. The ghost of hybrids past: fixation of arctic charr (Salvelinus alpinus) mitochondrial DNA in an introgressed population of lake trout (S. namaycush). Molecular Ecology. 7: 127-132.
1997
39. MARTIN, S., J.-Y. SAVARIA, C. AUDET, L. BERNATCHEZ. 1997. Microsatellites reveal no evidence for inbreeding effects but low-inter-stock genetic diversity among brook charr stocks used for production in Québec. Bulletin of the Aquaculture Association of Canada. 97-2: 21-23.
38. FONTAINE, P.-M., J.J. DODSON, L.BERNATCHEZ, A. Slettan. 1997. A genetic test of metapopulation structure in Atlantic salmon (Salmo salar) using microsatellites. Canadian Journal of Fisheries and Aquatic Sciences. 54: 2434-2442.
37. TESSIER, N., L. BERNATCHEZ, J.M. WRIGHT. 1997. Population structure and impact of supportive breeding inferred from mitochondrial and microsatellite DNA analyses in landlocked Atlantic salmon(Salmo salar L.). Molecular Ecology. 6: 735-750.
36. ANGERS, A., L. BERNATCHEZ. 1997. Complex evolution of an imperfect salmonid microsatellite and its consequences in inferring allelic divergence from size information. Molecular Biology and Evolution. 14: 230-238.
35. PIGEON, D., A. CHOUINARD, L. BERNATCHEZ. 1997. Multiple modes of speciation involved in the parallel evolution of sympatric morphotypes of lake whitefish (Coregonus clupeaformis). Evolution. 51: 196-205.
34. BERNATCHEZ, L. 1997. Mitochondrial DNA analysis confirms the existence of two glacial races of rainbow smelt (Osmerus mordax) and their reproductive isolation in the St. Lawrence R. Estuary (Québec, Canada). Molecular Ecology. 7: 73-83.
33. LU, G., S. LI, L. BERNATCHEZ. 1997. Mitochondrial DNA diversity, population structure, and conservation genetics of four native carps within the Yangtze R., China. Canadian Journal of Fisheries and Aquatic Sciences. 54: 47-58
1996
32. OSINOV, A., L. BERNATCHEZ. 1996. Atlantic and Danubean phylogenetic groupings of brown trout (Salmo trutta L.) complex: genetic divergence, evolution, and conservation. Journal of Ichthyology. 36: 762-786.
31. CHOUINARD, A., D. PIGEON, L. BERNATCHEZ. 1996. Lack of specialization in trophic morphology between genetically differentiated dwarf and normal forms of lakewhitefish (Coregonus clupeaformis Mitchill) in Lac de l'Est, Québec. Canadian Journal of Zoology. 74: 1989-1998.
30. ANGERS, A., L. BERNATCHEZ. 1996.Usefulness of heterologous microsatellites obtained from brook charr, Salvelinus fontinalis Mitchill, in all Salvelinus species. Molecular Ecology. 5: 317-319.
29. BERNATCHEZ, L., J. A. VUORINEN, R. A. BODALY, J. J. DODSON . 1996. Genetic evidence for reproductive isolation and multiple origins of sympatric trophic ecotypes of whitefish (Coregonus). Evolution. 50: 624-635.
28. BERNATCHEZ, L., S. MARTIN. 1996. Mitochondrial DNA diversity in anadromous rainbow smelt, Osmerus mordax Mitchill: a genetic assessment of the member-vagrant hypothesis. Canadian Journal of Fisheries and Aquatic Sciences. 53: 424-433.
1995-1991
27. TESSIER, N., L. BERNATCHEZ, P. Presa, B. ANGERS. 1995. Gene diversity analysis of mitochondrial DNA, microsatellites and allozymes in landlocked Atlantic salmon. Journal of Fish Biology. 47(suppl. A): 156-163.
26. ANGERS, B., L. BERNATCHEZ, A. ANGERS, L. DESGROSEILLERS .1995. Specific microsatellite loci for brook charr (Salvelinus fontinalis Mitchill) reveals strong population subdivision on microgeographic scale. Journal of Fish Biology. 47(suppl. A): 177-185.
25. BERNATCHEZ, L. 1995. A role for Molecular systematics in defining evolutionary significant units (ESU) in fishes. P. 114-132 in J. L. Nielsen, editor. Evolution and the aquatic ecosystem: defining unique units in population conservation. Am. Fish. Soc. Symposium. 17, Bethesda, Maryland.
24. BERNATCHEZ, L., H. GLÉMET, C. WILSON, R.G. DANZMANN. 1995. Introgression and fixation of arctic charr (Salvelinus alpinus) mitochondrial genome in an allopatric population of brook trout (Salvelinus fontinalis). Canadian Journal of Fisheries and Aquatic Sciences. 52: 179-185
23. BERNATCHEZ, L., A. OSINOV. 1995. Genetic diversity of trout (genus Salmo) from its most eastern native range based on mitochondrial DNA and nuclear gene variation. Molecular Ecology. 4: 285-297.
22. BERNATCHEZ, L., J.J. DODSON. 1994. Phylogenetic relationships among Palearctic and Nearctic whitefish (Coregonus sp.) populations as revealed by mitochondrial DNA variation. Canadian Journal of Fisheries and Aquatic Sciences. 51(suppl. 1): 240-251.
21. BERNATCHEZ, L. 1994.Techniques de biologie moléculaire comme outils de gestion des pêches: Bilan et perspectives. Bulletin Français de la Pêche et de la Pisciculture. 332: 1-9.
20. GIUFFRA, E., L. BERNATCHEZ, R. GUYOMARD. 1994. Mitochondrial control region and protein coding genes sequence variation among phenotypic forms of brown trout, Salmo trutta L., from Northern Italy. Molecular Ecology. 3: 161-171.
19. FERGUSON, M.M., L. BERNATCHEZ, M. GATT, B. KONKLE, S. LEE, M. MALOTT. 1993. Distribution of mitochondrial DNA variation in lake sturgeon (Acipenser fulvescens) from the Moose River basin, Ontario. Journal of Fish Biology. 43: 91-101.
18. BERNATCHEZ, L., R. G. DANZMANN .1993. Congruence in control-region sequence and restriction-site variation in mitochondrial DNA of Brook charr (Salvelinus fontinalis Mitchill). Molecular Biology and Evolution. 10: 1002-1014.
17. VUORINEN, J., D. BODALY, J.D. REIST, L. BERNATCHEZ, J. J. DODSON. 1993.Genetic and morpholgical analysis of two sympatric lake whitefish (Coregonus clupeaformis, Mitchill) forms in Como Lake, Ontario. Canadian Journal of Fisheries and Aquatic Sciences. 50: 210-216.
16. BERNATCHEZ, L., R. GUYOMARD, F. BONHOMME. 1992. DNA sequence variation of the mitochondrial control region among morphologically and geographically remote European brown trout Salmo trutta populations. Molecular Ecology. 1: 161-173.
15. BERNATCHEZ, L., J.J. DODSON, F. COLOMBANI. 1991.Phylogenetic relationships among coregonine fishes as revealed by mitochondrial DNA restriction analysis. Journal of Fish Biology. 39 (suppl. A): 283-290.
14. BERNATCHEZ, L., J. J. DODSON. 1991.Phylogeographic structure in mitochondrial DNA of the Lake Whitefish (Coregonus clupeaformis) in North America and its relationships to Pleistocene glaciations. Evolution. 45: 1016-1035.
13. BERNATCHEZ, L., EDGE, T.A., DODSON, J.J., S. U. QADRI .1991. Mitochondrial DNA and isozyme electrophoretic analyses of the endangered Acadian whitefish, Coregonus huntsmani, Scott 1987. Canadian Journal of Zoology. 69: 311-316.
12. BABY, M.-C., BERNATCHEZ, L., and J. J. DODSON. 1991. Genetic structure and relationships among anadromous and landlocked populations of rainbow smelt (Osmerus mordax, Mitchill) as revealed by mitchondrial DNA restriction analysis. Journal of Fish Biology. 39 (suppl. A): 61-68.
11. DODSON, J. J., CARCADDEN, J. E., BERNATCHEZ, L. and F. COLOMBANI. 1991. Relationship between spawning mode and phylogeographic structure in mitochondrial DNA of North Atlantic capelin (Mallotus villosus) populations. Marine Ecology Progress Series. 76: 103-113.
1990-1985
10. BERNATCHEZ, L., and J. J. DODSON. 1990. Allopatric origin of sympatric populations of lake whitefish (Coregonus clupeaformis) as revealed by mitochondrial DNA restriction analysis. Evolution. 44: 1263-1271.
9. BERNATCHEZ, L., and J. J. DODSON. 1990.Mitochondrial DNA variation among anadromous populations of cisco (Coregonus artedii) as revealed by restriction analysis. Canadian Journal of Fisheries and Aquatic Sciences. 47: 533-543.
8. BERNATCHEZ, L., DODSON, J. J. and S. BOIVIN. 1989. Population bottlenecks: influence on mitochondrial DNA diversity and its effect in stock discrimination. Journal of Fish Biology. 35 (suppl. A): 233-244.
7. KEMP, A., BERNATCHEZ, L. and J. J. DODSON. 1989. A revision of coregonid fish distribution and abundance in eastern James-Hudson Bay. Environmental Biology of Fishes. 26: 247-255.
6. BERNATCHEZ, L., SAVARD, L., DODSON, J. J. and D. PALLOTTA .1988. Mitochondrial DNA sequence heterogeneity among James Hudson Bay anadromous coregonines. Finnish Fisheries Research. 9: 17-26.
5. BERNATCHEZ, L. and J. J. DODSON. 1987. Relationship between bioenergetics and behavior in anadromous fish migrations. Canadian Journal of Fisheries and Aquatic Sciences. 44: 399-407.
4. BERNATCHEZ, L. and J.J. DODSON. 1987. Extended freshwater residence prior to spawning: the influence of water velocity and temperature on swimming capacity and its role in controlling the upstream migration of anadromous coregonines of James Bay, Québec. American Fisheries Society Symposium. 1: 555.
3. BERNATCHEZ, L. and J.J. DODSON. 1987.Why do so few anadromous populations minimize the energetic cost of their upstream migrations? American Fisheries Society Symposium. 1: 556.
2. DODSON, J. J., LAMBERT, Y. and L. BERNATCHEZ .1986.Comparative migratory and reproductive strategies of the sympatric anadromous coregonine species of James Bay. In M.A. Rankin. ed. Migration : Mechanisms and adaptive significance. Contribution to Marine Sciences. Suppl. 27: 296-315.
1. BERNATCHEZ, L. and J. J. DODSON. 1985.The influence of current speed and temperature on the swimming capacity of lake whitefish (Coregonus clupeaformis) and cisco (C.artedii). Canadian Journal of Fisheries and Aquatic Sciences. 42: 1522-1529.

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